RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 F3P13726 295 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 DDX5P17844 614 aaKnown RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 NELFEP18615 380 aaKnown RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 UQCRC2P22695 453 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 CHI3L1P36222 383 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 DCTP40126 519 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 FRKP42685 505 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 RABIFP47224 123 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 ALDH9A1P49189 494 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 PLA2G16P53816 162 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 CASP9P55211 416 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 PCBP4P57723 403 aaKnown RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 RBBP4Q09028 425 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 FADDQ13158 208 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TDGQ13569 410 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TEAD4Q15561 434 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 SLC5A12Q1EHB4 618 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 ADPRMQ3LIE5 342 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 LIN52Q52LA3 116 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 GCNT6Q5T4J0 391 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TRIM40Q6P9F5 258 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 ANGPTL8Q6UXH0 198 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 Q6ZS52 159 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 ABI3BPQ7Z7G0 1075 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MFSD9Q8NBP5 474 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 OR13H1Q8NG92 308 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MAL2Q969L2 176 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 SDCCAG3Q96C92 435 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MS4A6EQ96DS6 147 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TOE1Q96GM8 510 aaKnown RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF764Q96H86 408 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MYCBPQ99417 103 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-201ENST00000276573 SRMSQ9H3Y6 488 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TMEM38AQ9H6F2 299 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 CXorf36Q9H7Y0 433 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 CAAP1Q9H8G2 361 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 SMURF2Q9HAU4 748 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 PRDM7Q9NQW5 492 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 TAS2R7Q9NYW3 318 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 USE1Q9NZ43 259 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 RAPGEFL1Q9UHV5 662 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MYO10Q9HD67 2058 aa9.13□□□□□ -0.95
TRIM55-201ENST00000276573 MAP3K13O43283 966 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 FKBP9O95302 570 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PGM3O95394 542 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ALBP02768 609 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 DRD2P14416 443 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SSR2P43308 183 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ARFIP1P53367 373 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CRYBA2P53672 197 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 MANFP55145 182 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PPP2R2BQ00005 443 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 EEF1A2Q05639 463 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PPP1R8Q12972 351 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 BIRC2Q13490 618 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 APOFQ13790 326 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ZIK1Q3SY52 487 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 FAM180BQ6P0A1 224 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ABHD17CQ6PCB6 329 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 USP51Q70EK9 711 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SYT13Q7L8C5 426 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 VTCN1Q7Z7D3 282 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 HS3ST5Q8IZT8 346 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 UCN3Q969E3 161 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 FBXL20Q96IG2 436 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 RDH12Q96NR8 316 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TRAPPC9Q96Q05 1148 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 MACROD1Q9BQ69 325 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 C17orf62Q9BQA9 187 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 NLNQ9BYT8 704 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TWSG1Q9GZX9 223 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SOX17Q9H6I2 414 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TM9SF3Q9HD45 589 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SLAMF7Q9NQ25 335 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ADPRHL2Q9NX46 363 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TEX10Q9NXF1 929 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 WSB2Q9NYS7 404 aaPredicted RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ACSL6Q9UKU0 697 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 ABCG2Q9UNQ0 655 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CYP8B1Q9UNU6 501 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 DMTF1Q9Y222 760 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 KLHL20Q9Y2M5 609 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 MAP4K5Q9Y4K4 846 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PCDHGA4Q9Y5G9 962 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 A0A1B0GTW7 788 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CHURC1-FNTBB4DL54 471 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PDPK1O15530 556 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 SUV39H1O43463 412 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 CLIC3O95833 236 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 STATHP02808 62 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 FABP3P05413 133 aa9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PABPC4LP0CB38 370 aaKnown RBP9.12□□□□□ -0.95
TRIM55-201ENST00000276573 PRKACGP22612 351 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms