RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CENPBD1B2RD01 187 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 GNB5O14775 395 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 WNT9AO14904 365 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 STATHP02808 62 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 EPHX1P07099 455 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 STK19P49842 368 aaPredicted RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TAS2R50P59544 299 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TSPAN5P62079 268 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 CCDC157Q569K6 752 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 MRPL10Q7Z7H8 261 aaKnown RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TICAM1Q8IUC6 712 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SAMD12Q8N8I0 201 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 C1orf216Q8TAB5 229 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 IFT27Q9BW83 186 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TRPS1Q9UHF7 1281 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 NUP50Q9UKX7 468 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 RIIAD1A6NNX1 92 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SCAMP1O15126 338 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 FKTNO75072 461 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 IFNGP01579 166 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ALPLP05186 524 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 FGFBP1Q14512 234 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 GINS1Q14691 196 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 AGAP6Q5VW22 663 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF438Q7Z4V0 828 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TRMT61BQ9BVS5 477 aaKnown RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SYNDIG1Q9H7V2 258 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SLC35C2Q9NQQ7 365 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 TNFRSF10DQ9UBN6 386 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 FBXO10Q9UK96 956 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ACSL6Q9UKU0 697 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 GPR45Q9Y5Y3 372 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 C2orf78A6NCI8 922 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 H3BSH0 61 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 M0R233 179 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 GPR39O43194 453 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 GJB3O75712 270 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF806P0C7X5 589 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ERP29P30040 261 aaKnown RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ZMYND11Q15326 602 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 Q6ZPB1 254 aaPredicted RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 NEIL3Q8TAT5 605 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 ARRDC2Q8TBH0 407 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 SMG9Q9H0W8 520 aaKnown RBP11.12□□□□□ -0.63
VPS33A-201ENST00000267199 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 OARD1Q9Y530 152 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 CORINQ9Y5Q5 1042 aa11.12□□□□□ -0.63
VPS33A-201ENST00000267199 INPPL1O15357 1258 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PSMD8P48556 350 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 DGKGP49619 791 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 RPS13P62277 151 aaKnown RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MEF2AQ02078 507 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SLITRK4Q8IW52 837 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 CCDC36Q8IYA8 594 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 CD200R1Q8TD46 325 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 C12orf66Q96MD2 445 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 ATOH8Q96SQ7 321 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 CCM2Q9BSQ5 444 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 DOHHQ9BU89 302 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 HDHD5Q9BXW7 423 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF69Q9UC07 566 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 ZFR2Q9UPR6 939 aaKnown RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 OR10H1Q9Y4A9 318 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 TRBV23OR9-2A0A075B6M9 112 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 A0A1W2PQL4 384 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 CLCA1A8K7I4 914 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 EEF1E1O43324 174 aaKnown RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 IDUAP35475 653 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 TGFBR2P37173 567 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SEMA3BQ13214 749 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 METTL4Q8N3J2 472 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 BEND7Q8N7W2 519 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 OR9Q2Q8NGE9 314 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 KCNN1Q92952 543 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MGME1Q9BQP7 344 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 GTPBP2Q9BX10 602 aaKnown RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 ARHGAP39Q9C0H5 1083 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 RPS17P08708 135 aaKnown RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PRKACBP22694 351 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 FNTBP49356 437 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 RAB8AP61006 207 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 FUNDC1Q8IVP5 155 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SLC22A15Q8IZD6 547 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms