RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 EEF1DP29692 281 aaKnown RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 HNRNPH1P31943 449 aaKnown RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 TRHRP34981 398 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 KCNC1P48547 511 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 MLF1P58340 268 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 GPX6P59796 221 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 ATP6V0D1P61421 351 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 OC90Q02509 493 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 CALCOCO2Q13137 446 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 RUNX2Q13950 521 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 SLBPQ14493 270 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS41-201ENST00000265745 ZKSCAN8Q15776 578 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 KRTCAP3Q53RY4 240 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 ZNF468Q5VIY5 522 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 SULT1C3Q6IMI6 304 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 SLC25A25Q6KCM7 469 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 VN1R5Q7Z5H4 357 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 GPSM1Q86YR5 675 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 SLC34A3Q8N130 599 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 KRT78Q8N1N4 520 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 ARMC10Q8N2F6 343 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TCAIMQ8N3R3 496 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 HORMAD2Q8N7B1 307 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TMEM178AQ8NBL3 297 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 THAP3Q8WTV1 239 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 GAL3ST3Q96A11 431 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 MS4A6EQ96DS6 147 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 UBXN10Q96LJ8 280 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 GPR22Q99680 433 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TMEM79Q9BSE2 394 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 NPLQ9BXD5 320 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 PHACTR1Q9C0D0 580 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 CNOT10Q9H9A5 744 aaKnown RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 NECTIN3Q9NQS3 549 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 DNAJC11Q9NVH1 559 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 LRFN1Q9P244 771 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 TXNDC16Q9P2K2 825 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 PTBP2Q9UKA9 531 aaKnown RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
VPS41-201ENST00000265745 CREBBPQ92793 2442 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 ITPR2Q14571 2701 aa9.1□□□□□ -0.95
VPS41-201ENST00000265745 SVILO95425 2214 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 A0A0G2JN53 185 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 A8MUA0 341 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 CCL21O00585 134 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ERI3O43414 337 aaKnown RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 SLC19A2O60779 497 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 STK16O75716 305 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 GSTA2P09210 222 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 TPP2P29144 1249 aaPredicted RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 GP5P40197 560 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 CA7P43166 264 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 CYB561P49447 251 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 PLA2G16P53816 162 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 PLTPP55058 493 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 HSD17B7P56937 341 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 RAB10P61026 200 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 RBPJQ06330 500 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 OR4D1Q15615 310 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ADPRMQ3LIE5 342 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 SP5Q6BEB4 398 aaPredicted RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 GALNTL5Q7Z4T8 443 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ZNF227Q86WZ6 799 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 SIAH3Q8IW03 269 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 SCUBE1Q8IWY4 988 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 APCDD1LQ8NCL9 501 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 OR2L5Q8NG80 312 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ITLN2Q8WWU7 325 aaPredicted RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 KIAA1191Q96A73 305 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ESAMQ96AP7 390 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ITPKCQ96DU7 683 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 WDR34Q96EX3 536 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 CCDC120Q96HB5 630 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 FAR2Q96K12 515 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 GPR137Q96N19 417 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 FRMD6Q96NE9 622 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 QRFPRQ96P65 431 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 RBBP8Q99708 897 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 DEFB126Q9BYW3 111 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 REXO4Q9GZR2 422 aaKnown RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 WWOXQ9NZC7 414 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 PPIEQ9UNP9 301 aaKnown RBP9.09□□□□□ -0.95
VPS41-201ENST00000265745 ENTPD4Q9Y227 616 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 ZNF835Q9Y2P0 537 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 MMACHCQ9Y4U1 282 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 CLDN16Q9Y5I7 305 aa9.09□□□□□ -0.95
VPS41-201ENST00000265745 A0A088AWK7 358 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ANKDD1BA6NHY2 528 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 NPIPA5E9PKD4 350 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CYR61O00622 381 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CLDN4O14493 209 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 CLGNO14967 610 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 ASNA1O43681 348 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 B3GALT2O43825 422 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 NME2P1O60361 137 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 SLC25A12O75746 678 aa9.08□□□□□ -0.96
VPS41-201ENST00000265745 FAM155BO75949 473 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms