RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CBX2Q14781 532 aaPredicted RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 CREB3L2Q70SY1 520 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 KANSL1Q7Z3B3 1105 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 MEIOBQ8N635 442 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 ZNF680Q8NEM1 530 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 ANGPTL6Q8NI99 470 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 NEIL3Q8TAT5 605 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 ING5Q8WYH8 240 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 MRPS31Q92665 395 aaKnown RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 TRMT61AQ96FX7 289 aaKnown RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 DOHHQ9BU89 302 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 ENOPH1Q9UHY7 261 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 ZFR2Q9UPR6 939 aaKnown RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 RPL36Q9Y3U8 105 aaKnown RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 LEUTXA8MZ59 168 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 PCDH7O60245 1069 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 BLVRAP53004 296 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 MCCD1P59942 119 aaPredicted RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 ERVFC1P60507 584 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 NOXRED1Q6NXP6 359 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.65■□□□□ 0.1
GPC1-201ENST00000264039 NT5C3BQ969T7 300 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 CPPED1Q9BRF8 314 aaPredicted RBP15.65■□□□□ 0.1
GPC1-201ENST00000264039 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
GPC1-201ENST00000264039 MUSKO15146 869 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 NME6O75414 186 aaPredicted RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 LHCGRP22888 699 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 FGL2Q14314 439 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 NTRK2Q16620 822 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 FBXL6Q8N531 539 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 C1orf52Q8N6N3 182 aaKnown RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 FAM46DQ8NEK8 389 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 SLC5A11Q8WWX8 675 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 UFD1Q92890 307 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 ZNF566Q969W8 418 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 CCDC115Q96NT0 180 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TTTY10Q9BZA0 68 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 SRRQ9GZT4 340 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 CRISP1P54107 249 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 HSF2Q03933 536 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 GCNT6Q5T4J0 391 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 WASH2PQ6VEQ5 465 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 HMGB4Q8WW32 186 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 ARMC5Q96C12 935 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 SCRN2Q96FV2 425 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 FCRL4Q96PJ5 515 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 MCCC1Q96RQ3 725 aaPredicted RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 ACPTQ9BZG2 426 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 ERVMER34-1Q9H9K5 563 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 KLK4Q9Y5K2 254 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 DOCK5Q9H7D0 1870 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 ARHGEF33A8MVX0 844 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TPPPO94811 219 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 C1QBP02746 253 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 SDC1P18827 310 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 SOX9P48436 509 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 PSPHP78330 225 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 MLLT1Q03111 559 aaPredicted RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 SYTL3Q4VX76 610 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TMEM40Q8WWA1 233 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 RAB8BQ92930 207 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 ERMAPQ96PL5 475 aaPredicted RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 AP5M1Q9H0R1 490 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TXNRD2Q9NNW7 524 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TMEM138Q9NPI0 162 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 FAM105AQ9NUU6 356 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.64■□□□□ 0.09
GPC1-201ENST00000264039 IL20RAQ9UHF4 553 aa15.64■□□□□ 0.09
GPC1-201ENST00000264039 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
GPC1-201ENST00000264039 INSIG1O15503 277 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 SLC25A27O95847 323 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 PRPS1L1P21108 318 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 PAICSP22234 425 aaKnown RBP15.63■□□□□ 0.09
GPC1-201ENST00000264039 SLC35F1Q5T1Q4 408 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 TMEM86AQ8N2M4 240 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 ZBTB2Q8N680 514 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 CD244Q9BZW8 370 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 RBFOX1Q9NWB1 397 aaKnown RBP15.63■□□□□ 0.09
GPC1-201ENST00000264039 REV1Q9UBZ9 1251 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 VIPR1P32241 457 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 PTGER3P43115 390 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 CLDN8P56748 225 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 CRYZQ08257 329 aaKnown RBP15.63■□□□□ 0.09
GPC1-201ENST00000264039 NAE1Q13564 534 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 C17orf107Q6ZR85 190 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 KIAA1958Q8N8K9 716 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 DENND6BQ8NEG7 585 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 APH1BQ8WW43 257 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 XAGE5Q8WWM1 108 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 LRR1Q96L50 414 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 TMEM121BQ9BXQ6 578 aaPredicted RBP15.63■□□□□ 0.09
GPC1-201ENST00000264039 LGALS8O00214 317 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 PGRMC2O15173 223 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 ACSL4O60488 711 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 ZNF806P0C7X5 589 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 SMIM10L2AP0DMW4 78 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 SMIM10L2BP0DMW5 78 aa15.63■□□□□ 0.09
GPC1-201ENST00000264039 GKP32189 559 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms