RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 H3BN98 237 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF197O14709 1029 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 NUAK1O60285 661 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 KRT8P05787 483 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 IDSP22304 550 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 HLA-FP30511 346 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 MAPK8P45983 427 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 CTSCP53634 463 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC46A3Q7Z3Q1 461 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 OR4K3Q96R72 315 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 FAM129BQ96TA1 746 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 MGLLQ99685 303 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 TPST2O60704 377 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 GCM2O75603 506 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 IGFBP1P08833 259 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 VEZF1Q14119 521 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 HSD11B1LQ7Z5J1 315 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 HMGN2P46Q86SG4 172 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 MMP21Q8N119 569 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 CBARPQ8N350 705 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 NEIL2Q969S2 332 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 SORBS1Q9BX66 1292 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 ZNF226Q9NYT6 803 aa13.87□□□□□ -0.19
SFSWAP-201ENST00000261674 PDZK1P1A8MUH7 402 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 NEDD8-MDP1E9PL57 170 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 ZW10O43264 779 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GADD45GO95257 159 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SOX6P35712 828 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TGM4P49221 684 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 AP1S2P56377 157 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 FADDQ13158 208 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PTGES3Q15185 160 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GGTA1PQ4G0N0 100 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TNFAIP8L2Q6P589 184 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TSEN54Q7Z6J9 526 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC34A3Q8N130 599 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 OVCA2Q8WZ82 227 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 FCGR1BQ92637 280 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 COL21A1Q96P44 957 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 DNAJC27Q9NZQ0 273 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PCDHGB6Q9Y5F9 930 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SPEGQ15772 3267 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PLXNA4Q9HCM2 1894 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 WWP2O00308 870 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 HOXB6P17509 224 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 CNR2P34972 360 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GCNT6Q5T4J0 391 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 LIPJQ5W064 366 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GDPD3Q7L5L3 318 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 CYB5D2Q8WUJ1 264 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 EPYCQ99645 322 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 LINC00597Q9H2U6 94 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 STOX2Q9P2F5 926 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 KCNE2Q9Y6J6 123 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 ALPK3Q96L96 1907 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GON4LQ3T8J9 2241 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PRAMEF33A0A0G2JMD5 474 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GFYI3L273 518 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PRAMEF10O60809 474 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 LILRB3O75022 631 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 KLK1P06870 262 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 ANXA8P13928 327 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SOX3P41225 446 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 VIPR2P41587 438 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TAS2R50P59544 299 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 DEFA1P59665 94 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 DEFA3P59666 94 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 CDC42P60953 191 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 MRPS15P82914 257 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 CDK6Q00534 326 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TBCEQ15813 527 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SLC5A12Q1EHB4 618 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 IQCCQ4KMZ1 466 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 TMEM203Q969S6 136 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PPCDCQ96CD2 204 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 PITX2Q99697 317 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 ASAH2Q9NR71 780 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 SNTG1Q9NSN8 517 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 GPATCH2Q9NW75 528 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 F5P12259 2224 aa13.86□□□□□ -0.19
SFSWAP-201ENST00000261674 EFCAB10A6NFE3 127 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 SAGE2PA6NJ88 616 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 RHOP08100 348 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 PIK3CBP42338 1070 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 CSNK1DP48730 415 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 RAE1P78406 368 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 COL9A2Q14055 689 aaPredicted RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 ANXA8L1Q5VT79 327 aa13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 METTL2BQ6P1Q9 378 aaKnown RBP13.85□□□□□ -0.19
SFSWAP-201ENST00000261674 TMEM220Q6QAJ8 160 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms