RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CETPP11597 493 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CPB1P15086 417 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF250P15622 560 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 NDUFS1P28331 727 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SSTR1P30872 391 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ADRA1BP35368 520 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GABRB2P47870 512 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 NAGLUP54802 743 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC26A5P58743 744 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GAS6Q14393 721 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR33Q49SQ1 333 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ZDHHC20Q5W0Z9 365 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DPY19L2P1Q6NXN4 242 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DEGS2Q6QHC5 323 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CHST15Q7LFX5 561 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 MINDY1Q8N5J2 469 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GCDHQ92947 438 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 MRI1Q9BV20 369 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM185BQ9H7F4 350 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CDHR5Q9HBB8 845 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CORINQ9Y5Q5 1042 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SPEF2Q9C093 1822 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR6C75A6NL08 312 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 H0YIV9 168 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 MATN3O15232 486 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC16A4O15374 487 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PEX10O60683 326 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SNRNP70P08621 437 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CYP2C8P10632 490 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 AKT1P31749 480 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SREBF1P36956 1147 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TAS2R40P59535 323 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 STXBP1P61764 594 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PTPN11Q06124 597 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 BAATQ14032 418 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 C6orf141Q5SZD1 244 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM65Q6PI78 240 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SEZ6L2Q6UXD5 910 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRC69Q6ZNQ3 347 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ADGRG2Q8IZP9 1017 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 Q8N402 240 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 LIX1Q8N485 282 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 EXD3Q8N9H8 876 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR13F1Q8NGS4 319 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 HTR3CQ8WXA8 447 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM120BQ96EK7 910 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SPATA33Q96N06 139 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC2A13Q96QE2 648 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR51E2Q9H255 320 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DHX35Q9H5Z1 703 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PTGFRNQ9P2B2 879 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CACNA1FO60840 1977 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 IL7RP16871 459 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CD58P19256 250 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DDTP30046 118 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PPP3R1P63098 170 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 IFITM2Q01629 132 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM35AQ53FP2 167 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 EFCAB12Q6NXP0 572 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 H3F3CQ6NXT2 135 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SHFQ7M4L6 423 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CMIPQ8IY22 773 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FBXO39Q8N4B4 442 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR10K1Q8NGX5 313 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR6F1Q8NGZ6 308 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 RNF31Q96EP0 1072 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 NAA50Q9GZZ1 169 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GLRX2Q9NS18 164 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 EGFL7Q9UHF1 273 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GDF2Q9UK05 429 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 NENFQ9UMX5 172 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 DUOX1Q9NRD9 1551 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TSPAN3O60637 253 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 POP7O75817 140 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CDRT1O95170 752 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SPDEFO95238 335 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 H2AFB2P0C5Z0 115 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ELK4P28324 431 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SP2Q02086 613 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CCINQ13939 588 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC39A12Q504Y0 691 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 C10orf120Q5SQS8 335 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ADGRD1Q6QNK2 874 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PTCHD4Q6ZW05 846 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GPD1LQ8N335 351 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 MFSD8Q8NHS3 518 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ATXN7L3BQ96GX2 97 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 MOB1AQ9H8S9 216 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 NMNAT1Q9HAN9 279 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FBXO8Q9NRD0 319 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 RAB6BQ9NRW1 208 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 RBAKQ9NYW8 714 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ACSL6Q9UKU0 697 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR10H1Q9Y4A9 318 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 PKD1L3Q7Z443 1732 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ROBO3Q96MS0 1386 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms