RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SRPK3Q9UPE1 567 aa12.29□□□□□ -0.44
LSM8-201ENST00000249299 FRYLO94915 3013 aa12.29□□□□□ -0.44
LSM8-201ENST00000249299 DMDP11532 3685 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 H0YIG0 161 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 P2RX6O15547 441 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 B3GALT2O43825 422 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 GALR3O60755 368 aaPredicted RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 PRAMEF10O60809 474 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 RFPL3O75679 317 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 OR2B3O76000 313 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 NSA2O95478 260 aaKnown RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 EIF2S1P05198 315 aaKnown RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 FAM58BPP0C7Q3 252 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 T-ENOLP0DO92 83 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 DDCP20711 480 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 CSRP1P21291 193 aaKnown RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 TACR1P25103 407 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 GCGRP47871 477 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 KLC1Q07866 573 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 PDE7AQ13946 482 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 FOXR1Q6PIV2 292 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 HACD2Q6Y1H2 254 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 SAMD14Q8IZD0 417 aaPredicted RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 DPP10Q8N608 796 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 ZNF501Q96CX3 271 aaPredicted RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 SPDL1Q96EA4 605 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 MARK4Q96L34 752 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 TSSK3Q96PN8 268 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 REEP4Q9H6H4 257 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 ANKHQ9HCJ1 492 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 SLC52A3Q9NQ40 469 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 FGF21Q9NSA1 209 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 FAM86C1Q9NVL1 165 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 KLHL3Q9UH77 587 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
LSM8-201ENST00000249299 CDC14AQ9UNH5 594 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 SPACA6W5XKT8 324 aa12.28□□□□□ -0.44
LSM8-201ENST00000249299 HYKKA2RU49 373 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 CCDC154A6NI56 674 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 B4E171 279 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 SAP18O00422 153 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 SCAMP2O15127 329 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 EEDO75530 441 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 KLHL18O94889 574 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 DKK1O94907 266 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 PGRP06401 933 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 KRT16P08779 473 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 HBQ1P09105 142 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ZNF888P0CJ79 500 aaPredicted RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 FOLR1P15328 257 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 IL10P22301 178 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 TLX1P31314 330 aaPredicted RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 CSTF2P33240 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
LSM8-201ENST00000249299 TSPAN7P41732 249 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 KIR3DL1P43629 444 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ZFP36L2P47974 494 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 SEPHS1P49903 392 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 TAS2R50P59544 299 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 BTN3A2P78410 334 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 SLAMF1Q13291 335 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 HKDC1Q2TB90 917 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ANXA8L1Q5VT79 327 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 CDCP2Q5VXM1 449 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 PRMT9Q6P2P2 845 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ZNF793Q6ZN11 406 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 TMPRSS9Q7Z410 1059 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 GPR180Q86V85 440 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 SNX32Q86XE0 403 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 VPS37AQ8NEZ2 397 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ROPN1LQ96C74 230 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 TEX37Q96LM6 180 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 CCDC74BQ96LY2 380 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 BHLHE41Q9C0J9 482 aaPredicted RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 RMND5AQ9H871 391 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ACTR5Q9H9F9 607 aaPredicted RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 FAM120CQ9NX05 1096 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 SIDT1Q9NXL6 827 aaKnown RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 LEF1Q9UJU2 399 aaPredicted RBP12.27□□□□□ -0.45
LSM8-201ENST00000249299 PSME2Q9UL46 239 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ASB4Q9Y574 426 aa12.27□□□□□ -0.45
LSM8-201ENST00000249299 ADAMTS9Q9P2N4 1935 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 MYO15AQ9UKN7 3530 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 C1orf226A1L170 272 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 SYNDIG1LA6NDD5 238 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 RTCAO00442 366 aaKnown RBP12.26□□□□□ -0.45
LSM8-201ENST00000249299 ANGPT2O15123 496 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 HCRTR1O43613 425 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 TMPRSS11DO60235 418 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 SH3BGRLO75368 114 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 KRT34O76011 436 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 CBX6O95503 412 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 FURINP09958 794 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 PTPN4P29074 926 aa12.26□□□□□ -0.45
LSM8-201ENST00000249299 IL12AP29459 219 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms