RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CLIP4Q8N3C7 705 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 SLC5A11Q8WWX8 675 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 S100ZQ8WXG8 99 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 NXPE3Q969Y0 559 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 RSPO3Q9BXY4 272 aaPredicted RBP24.43■■□□□ 1.5
RAB40C-201ENST00000248139 ACER3Q9NUN7 267 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 MS4A12Q9NXJ0 267 aa24.43■■□□□ 1.5
RAB40C-201ENST00000248139 KIAA0100Q14667 2235 aaKnown RBP24.42■■□□□ 1.5
RAB40C-201ENST00000248139 LILRB5O75023 590 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 DNTTP04053 509 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 IGFBP1P08833 259 aaPredicted RBP24.42■■□□□ 1.5
RAB40C-201ENST00000248139 ST3GAL4Q11206 333 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 OR9A1PQ8NGU1 263 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 ZNF675Q8TD23 568 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 PHF10Q8WUB8 498 aaKnown RBP24.42■■□□□ 1.5
RAB40C-201ENST00000248139 CFHR5Q9BXR6 569 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 QSOX1O00391 747 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 CDK1P06493 297 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 TPP2P29144 1249 aaPredicted RBP24.42■■□□□ 1.5
RAB40C-201ENST00000248139 GPR1P46091 355 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 ELP6Q0PNE2 266 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 FAM71E1Q6IPT2 247 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 VN1R5Q7Z5H4 357 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 ZNF605Q86T29 641 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 STX19Q8N4C7 294 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 OR5AR1Q8NGP9 310 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 DTD2Q96FN9 168 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 DACH2Q96NX9 599 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 TAS2R9Q9NYW1 312 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 MAFFQ9ULX9 164 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 DUSP12Q9UNI6 340 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 LRRK1Q38SD2 2015 aa24.42■■□□□ 1.5
RAB40C-201ENST00000248139 TRBC2A0A5B9 178 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 POP7O75817 140 aaKnown RBP24.41■■□□□ 1.5
RAB40C-201ENST00000248139 TGM1P22735 817 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 FEN1P39748 380 aaKnown RBP24.41■■□□□ 1.5
RAB40C-201ENST00000248139 CTSKP43235 329 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 ALDH9A1P49189 494 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 LRRC74AQ0VAA2 488 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 UAP1L1Q3KQV9 507 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 ZNF658BQ4V348 819 aaPredicted RBP24.41■■□□□ 1.5
RAB40C-201ENST00000248139 NLRP8Q86W28 1048 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 RAB8BQ92930 207 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 CHCHD6Q9BRQ6 235 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 SPATA9Q9BWV2 254 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 CXorf36Q9H7Y0 433 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 IMPAD1Q9NX62 359 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 TAAR2Q9P1P5 351 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 RECKO95980 971 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 EEF1A2Q05639 463 aaKnown RBP24.41■■□□□ 1.5
RAB40C-201ENST00000248139 NXPE4Q6UWF7 544 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 RBM12BQ8IXT5 1001 aaKnown RBP24.41■■□□□ 1.5
RAB40C-201ENST00000248139 UCN3Q969E3 161 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 FAM83CQ9BQN1 747 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 CENPOQ9BU64 300 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 MIEF1Q9NQG6 463 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 SNX11Q9Y5W9 270 aa24.41■■□□□ 1.5
RAB40C-201ENST00000248139 TSPAN11A1L157 253 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 TRIM43BA6NCK2 446 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 CLDN24A6NM45 220 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 GASTP01350 101 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 ADORA3P0DMS8 318 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 FAM43BQ6ZT52 329 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 HMGN2P46Q86SG4 172 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 AQP11Q8NBQ7 271 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 TRIM43Q96BQ3 446 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 Q96MT0 163 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 TOX2Q96NM4 488 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 BCL7BQ9BQE9 202 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 EHD1Q9H4M9 534 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 SLAMF7Q9NQ25 335 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 ATAD3AQ9NVI7 634 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 ASF1AQ9Y294 204 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 TCF20Q9UGU0 1960 aaKnown RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 PRRT4C9JH25 899 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 CLTBP09497 229 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 EPCAMP16422 314 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 PCSK2P16519 638 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 PTPN2P17706 415 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 DGKGP49619 791 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 RPS3AP61247 264 aaKnown RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 PTGES3Q15185 160 aaKnown RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 DHCR24Q15392 516 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 KLHL17Q6TDP4 642 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 OLIG3Q7RTU3 272 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 LAS2Q8IYD9 372 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 B3GNT7Q8NFL0 401 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 GOT1L1Q8NHS2 421 aaPredicted RBP24.4■■□□□ 1.5
RAB40C-201ENST00000248139 HTRA1Q92743 480 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 ITFG2Q969R8 447 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 OR5M11Q96RB7 305 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 SGPP1Q9BX95 441 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 CKAP5Q14008 2032 aa24.4■■□□□ 1.5
RAB40C-201ENST00000248139 TBX1O43435 398 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 GADD45GO95257 159 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 PTGER1P34995 402 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 EIF2B2P49770 351 aaKnown RBP24.39■■□□□ 1.5
RAB40C-201ENST00000248139 HIST2H2AA3Q6FI13 130 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 LSRQ86X29 649 aaPredicted RBP24.39■■□□□ 1.5
RAB40C-201ENST00000248139 LRRC56Q8IYG6 542 aaPredicted RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms