RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CARD17Q5XLA6 110 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CCDC116Q8IYX3 515 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SNAPC3Q92966 411 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF558Q96NG5 402 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 STRA6Q9BX79 667 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NDRG2Q9UN36 371 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 CCDC163A0A0D9SF12 145 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF823P16415 610 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 KCNC1P48547 511 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ATP6AP1Q15904 470 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 PAGE3Q5JUK9 113 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SARDHQ9UL12 918 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 DISP2A7MBM2 1401 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ALDOBP05062 364 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 TUBA1BP68363 451 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 IL10RBQ08334 325 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SF3B4Q15427 424 aaKnown RBP eCLIP7.26□□□□□ -1.251e-6■■■□□ 18.7
RIF1-201ENST00000243326 TUBA1AQ71U36 451 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 TMEM145Q8NBT3 493 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ASB15Q8WXK1 588 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 TTPALQ9BTX7 342 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF223Q9UK11 482 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 PLCE1Q9P212 2302 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NBASA2RRP1 2371 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 LOC105369274A0A096LPK9 316 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 BHMG1C9JSJ3 638 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 GRID2O43424 1007 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 PORP16435 677 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 HOXB8P17481 243 aaPredicted RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 TUBA3EQ6PEY2 450 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 DPY19L3Q6ZPD9 716 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 TICAM1Q8IUC6 712 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 OR4N4Q8N0Y3 316 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 AIFM2Q9BRQ8 373 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 GTPBP2Q9BX10 602 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 UTS2RQ9UKP6 389 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 SH2B3Q9UQQ2 575 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 KERAO60938 352 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 H1F0P07305 194 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 ACRP10323 421 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 PARP15Q460N3 678 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZC3H14Q6PJT7 736 aaKnown RBP7.26□□□□□ -1.25
RIF1-201ENST00000243326 MON1AQ86VX9 555 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 NETO1Q8TDF5 533 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 LMF1Q96S06 567 aa7.26□□□□□ -1.25
RIF1-201ENST00000243326 ZNF35P13682 527 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ZNF20P17024 532 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SLC6A4P31645 630 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 STK19P49842 368 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 C1QTNF8P60827 252 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 FGFBP1Q14512 234 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AMZ1Q400G9 498 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ZFP82Q8N141 532 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 KCNK13Q9HB14 408 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ANKHQ9HCJ1 492 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 IRGMA1A4Y4 181 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ESR1P03372 595 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 DYRK1AQ13627 763 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 WDTC1Q8N5D0 677 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 VPS29Q9UBQ0 182 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 FBXL21Q9UKT6 434 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 GPR39O43194 453 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AOC2O75106 756 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ABHD18Q0P651 414 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 ARFRP1Q13795 201 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 LRRC32Q14392 662 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SMAD2Q15796 467 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 KIAA2026Q5HYC2 2103 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TAS1R3Q7RTX0 852 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 RNF167Q9H6Y7 350 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 RANGRFQ9HD47 186 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 KANSL3Q9P2N6 904 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 RD3LP0DJH9 198 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PRDX3P30048 256 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 ZNF611Q8N823 705 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 OR2B2Q9GZK3 357 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 FAM83DQ9H4H8 585 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AKAP7Q9P0M2 348 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 TTC34A8MYJ7 566 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 PLSCR1O15162 318 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TXNDC12O95881 172 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 TP53P04637 393 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 LINC00471Q8N535 108 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SLC5A8Q8N695 610 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 GPR22Q99680 433 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 SLC30A3Q99726 388 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 WDR77Q9BQA1 342 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 NTMT1Q9BV86 223 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 MEAF6Q9HAF1 191 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 DNAJB4Q9UDY4 337 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 NACAE9PAV3 2078 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 AKAP8O43823 692 aaKnown RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 FMO6PO60774 539 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 GDF6Q6KF10 455 aaPredicted RBP7.25□□□□□ -1.25
RIF1-201ENST00000243326 CILP2Q8IUL8 1156 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 NPRL2Q8WTW4 380 aa7.25□□□□□ -1.25
RIF1-201ENST00000243326 C20orf27Q9GZN8 174 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms