RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CHST14Q8NCH0 376 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 FAM46DQ8NEK8 389 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PEX13Q92968 403 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 F2RL3Q96RI0 385 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 MGME1Q9BQP7 344 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 C11orf84Q9BUA3 381 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 SORBS1Q9BX66 1292 aaKnown RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 MARF1Q9Y4F3 1742 aaKnown RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 SCN1AP35498 2009 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 FAM86C2PA6NEL3 165 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 FAM25EA8MYX2 175 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 LEFTY1O75610 366 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 OR6A2O95222 327 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 ZNF8P17098 575 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CD70P32970 193 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 DGKGP49619 791 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CDH11P55287 796 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 RING1Q06587 406 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 ODF4Q2M2E3 257 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 BICRALQ6AI39 1079 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 TAS1R1Q7RTX1 841 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 AMZ2Q86W34 360 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 OR51G2Q8NGK0 314 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PIGXQ8TBF5 258 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 LRR1Q96L50 414 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 EFCAB11Q9BUY7 163 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 RNF167Q9H6Y7 350 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 NFKBIL1Q9UBC1 381 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-201ENST00000226574 PGAP2Q9UHJ9 254 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
NFKB1-201ENST00000226574 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 LRRC72A6NJI9 287 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 J3KTA2 159 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 PRAMEF12O95522 483 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 MRPL3P09001 348 aaKnown RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 ATF4P18848 351 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 CD40LGP29965 261 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 PIN1Q13526 163 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 MAD2L1BPQ15013 274 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 CATSPEREQ5SY80 951 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 TUBA3EQ6PEY2 450 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 FAM170BA6NMN3 283 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 FRS3O43559 492 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 LATO43561 262 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 REEP3Q6NUK4 255 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 SPRED1Q7Z699 444 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 BTLAQ7Z6A9 289 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 PAPD5Q8NDF8 572 aaKnown RBP13.21□□□□□ -0.29
NFKB1-201ENST00000226574 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 IKZF5Q9H5V7 419 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
NFKB1-201ENST00000226574 TNFRSF10BO14763 440 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.3
NFKB1-201ENST00000226574 CRISP3P54108 245 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF45Q02386 682 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 SLC9A5Q14940 896 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 SPIN4Q56A73 249 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 CLLU1OSQ5K130 101 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 BEND5Q7L4P6 421 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF548Q8NEK5 533 aaPredicted RBP13.21□□□□□ -0.3
NFKB1-201ENST00000226574 ISL2Q96A47 359 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 LMAN2LQ9H0V9 348 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 REEP4Q9H6H4 257 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 ACOT13Q9NPJ3 140 aa13.21□□□□□ -0.3
NFKB1-201ENST00000226574 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 MROH6A6NGR9 719 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 FAM227AF5H4B4 570 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CD300CQ08708 224 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 GNA13Q14344 377 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 ADPRMQ3LIE5 342 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 FRRS1Q6ZNA5 592 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 FAM83FQ8NEG4 500 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 OR14C36Q8NHC7 312 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 P2RY13Q9BPV8 354 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 FEZF1A0PJY2 475 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CLCA1A8K7I4 914 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 J3QLW9 94 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 MID1O15344 667 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 DYRK3O43781 588 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 TYRP14679 529 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF19P17023 458 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 C4BPBP20851 252 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 EPHA2P29317 976 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 FAM180AQ6UWF9 173 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 GRHL3Q8TE85 626 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms