RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 B8ZZF3 427 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 PSMD12O00232 456 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 SPAG7O75391 227 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SEC24DO94855 1032 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 OR4F21O95013 312 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 ETHE1O95571 254 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 MYL2P10916 166 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 IMPDH1P20839 514 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 MAOAP21397 527 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZNF10P21506 573 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 ATP5A1P25705 553 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 SERPINB1P30740 379 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 CRHR1P34998 444 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 HNRNPFP52597 415 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 MTTPP55157 894 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 RAB38P57729 211 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 TGM3Q08188 693 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 MYBPC3Q14896 1274 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 NSDHLQ15738 373 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 TMEM35AQ53FP2 167 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SGO1Q5FBB7 561 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 DEPDC1Q5TB30 811 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 KHDRBS2Q5VWX1 349 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 TTC19Q6DKK2 380 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 CPEB2Q7Z5Q1 589 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 TRABD2AQ86V40 505 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SLC22A9Q8IVM8 553 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SRRM1Q8IYB3 904 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 RIBC1Q8N443 379 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 CCNYL1Q8N7R7 359 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 CCDC63Q8NA47 563 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 FAM47BQ8NA70 645 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 TMEM52Q8NDY8 209 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 REPS1Q96D71 796 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 THOC3Q96J01 351 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 PTCHD1Q96NR3 888 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 KCNC2Q96PR1 638 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SERINC2Q96SA4 455 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 SMAD5Q99717 465 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 NPLQ9BXD5 320 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZNF700Q9H0M5 742 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 NECTIN3Q9NQS3 549 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 FARSBQ9NSD9 589 aaKnown RBP11.93□□□□□ -0.5
LSM5-201ENST00000223084 ADGRE2Q9UHX3 823 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZNF225Q9UK10 706 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 GRID1Q9ULK0 1009 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 TSC22D4Q9Y3Q8 395 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 BSNQ9UPA5 3926 aa11.93□□□□□ -0.5
LSM5-201ENST00000223084 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 PLPP1O14494 284 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 PRMT3O60678 531 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 OTCP00480 354 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 CREB1P16220 341 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 JAK1P23458 1154 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 SSR2P43308 183 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 RAP1GDS1P52306 607 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 LIM2P55344 173 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 SOX8P57073 446 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 OR4D2P58180 307 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 PHEXP78562 749 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 ZNF844Q08AG5 666 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 AP5B1Q2VPB7 878 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 VWA5B1Q5TIE3 1220 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 FRG2Q64ET8 278 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 OR4C11Q6IEV9 310 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 ACOT4Q8N9L9 421 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 BANPQ8N9N5 519 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 SRFBP1Q8NEF9 429 aaKnown RBP11.92□□□□□ -0.5
LSM5-201ENST00000223084 RGMAQ96B86 450 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 L3HYPDHQ96EM0 354 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 FRG2BQ96QU4 278 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 MAPKAP1Q9BPZ7 522 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 WDR77Q9BQA1 342 aaPredicted RBP11.92□□□□□ -0.5
LSM5-201ENST00000223084 TBCDQ9BTW9 1192 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 LHPPQ9H008 270 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 ZBTB20Q9HC78 741 aaPredicted RBP11.92□□□□□ -0.5
LSM5-201ENST00000223084 RIC8BQ9NVN3 520 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 KCMF1Q9P0J7 381 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 DAPP1Q9UN19 280 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 G3BP2Q9UN86 482 aaKnown RBP11.92□□□□□ -0.5
LSM5-201ENST00000223084 ZNF451Q9Y4E5 1061 aa11.92□□□□□ -0.5
LSM5-201ENST00000223084 HEMK1Q9Y5R4 338 aaPredicted RBP11.92□□□□□ -0.5
LSM5-201ENST00000223084 MYOCOSA0A1B0GUC4 107 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 A0A1W2PQ72 361 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 A8MUA0 341 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 TGFBR3LH3BV60 316 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 FOXE1O00358 373 aaPredicted RBP11.91□□□□□ -0.5
LSM5-201ENST00000223084 CYR61O00622 381 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 PCDH17O14917 1159 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 EEDO75530 441 aaKnown RBP11.91□□□□□ -0.5
LSM5-201ENST00000223084 TUBBP07437 444 aa11.91□□□□□ -0.5
LSM5-201ENST00000223084 CYC1P08574 325 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms