RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 KDELR2P33947 212 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 Q6ZPB1 254 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 PLEKHM3Q6ZWE6 761 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CEP68Q76N32 757 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 Q8N9G6 341 aaPredicted RBP11.58□□□□□ -0.56
CHPF2-201ENST00000035307 HM13Q8TCT9 377 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 IL21RQ9HBE5 538 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 CD320Q9NPF0 282 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 SNTG1Q9NSN8 517 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 BTBD3Q9Y2F9 522 aa11.58□□□□□ -0.56
CHPF2-201ENST00000035307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 NDUFS4O43181 175 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 NUDT7P0C024 238 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 PPIBP23284 216 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 YBX1P67809 324 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 RCAN2Q14206 197 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 HEPACAMQ14CZ8 416 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 EIF4HQ15056 248 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TMEFF1Q8IYR6 380 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CDK20Q8IZL9 346 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 SIX5Q8N196 739 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 DNASE1L2Q92874 299 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ALG14Q96F25 216 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 POLR2J3Q9H1A7 115 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TBC1D17Q9HA65 648 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 OR51B4Q9Y5P0 310 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CPED1A4D0V7 1026 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 POM121BA6NF01 834 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 EFCAB9A8MZ26 197 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 PDPK1O15530 556 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 INMTO95050 263 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CCNB2O95067 398 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 DCNP07585 359 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 HNMTP50135 292 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 WSCD2Q2TBF2 565 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TBC1D25Q3MII6 688 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ZDHHC20Q5W0Z9 365 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ADNP2Q6IQ32 1131 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CADM2Q8N3J6 435 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TRAM1L1Q8N609 369 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 AQP11Q8NBQ7 271 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 IL20RAQ9UHF4 553 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF232Q9UNY5 417 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 LOC110117498-PIK3R3F6TDL0 507 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ADAMDEC1O15204 470 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CLPXO76031 633 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 PENKP01210 267 aaPredicted RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CKMT1AP12532 417 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 SDC1P18827 310 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 IL12AP29459 219 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 RPL6Q02878 288 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ATP6AP1Q15904 470 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 SMN1Q16637 294 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TRIQKQ629K1 86 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 ERI1Q8IV48 349 aaKnown RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 PATE1Q8WXA2 126 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
CHPF2-201ENST00000035307 OR51V1Q9H2C8 321 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 CORO2BQ9UQ03 480 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 SLC27A6Q9Y2P4 619 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 IRAK3Q9Y616 596 aa11.57□□□□□ -0.56
CHPF2-201ENST00000035307 SNTNA6NMZ2 147 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CCNDBP1O95273 360 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 FGF4P08620 206 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 DNAJA1P31689 397 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 RPL4P36578 427 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CD47Q08722 323 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 GPR68Q15743 365 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TIGD6Q17RP2 521 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 VMACQ2NL98 169 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 C6orf141Q5SZD1 244 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 KIAA1161Q6NSJ0 714 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 FAM217AQ8IXS0 508 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 SVOPLQ8N434 492 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TEX47Q8TBZ9 253 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CIDECQ96AQ7 238 aaPredicted RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 HTR1EP28566 365 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TPP2P29144 1249 aaPredicted RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TLX1P31314 330 aaPredicted RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 MRPL28Q13084 256 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 RAPSNQ13702 412 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 ANGPT1Q15389 498 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 KLHL35Q6PF15 583 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 RNF111Q6ZNA4 994 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CYP4Z2PQ8N1L4 340 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 LMX1AQ8TE12 382 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 PEX13Q92968 403 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CMTM7Q96FZ5 175 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TOE1Q96GM8 510 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 GTPBP2Q9BX10 602 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 TIMMDC1Q9NPL8 285 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 RASAL1O95294 804 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 MT-ND2P03891 347 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms