RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Slco2b1Q8BXB6 683 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tgif2Q8C0Y1 237 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Syn3Q8JZP2 579 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adgrf1Q8VEC3 908 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 4933421I07RikQ9D420 214 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Plpp6Q9D4F2 292 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Serpinb7Q9D695 380 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cyp4v2Q9DBW0 525 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 March7Q9WV66 693 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Kbtbd6E9PYD7 486 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Kbtbd7G5E8C2 690 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Etaa1Q5SVT3 877 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mapk3Q63844 380 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cyp2c54Q6XVG2 490 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc36a3Q811P0 477 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PgghgQ8BP56 690 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zc2hc1cQ8CCG1 527 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr345Q8VGK4 311 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc25a36Q922G0 311 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gtpbp8Q9CY28 285 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Arl6ip1Q9JKW0 203 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myh10Q61879 1976 aaKnown RBP9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 H2-ObO35424 271 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ech1O35459 327 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ifi204P0DOV2 619 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Glb1l2Q3UPY5 636 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Btg1-ps1Q3V0S2 161 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Btg1-ps2Q3V0X0 161 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pinx1Q9CZX5 332 aaKnown RBP9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Atad1Q9D5T0 361 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adam18Q9R157 719 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lbx2Q9WUN8 195 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gys1Q9Z1E4 738 aaKnown RBP9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ugt2b17P17717 530 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Actc1P68033 377 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Acta1P68134 377 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pros1Q08761 675 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cbx5Q61686 191 aaKnown RBP9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Znf182Q6P560 627 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tas2r140Q7TQA4 312 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gpn1Q8VCE2 372 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rnf130Q8VEM1 419 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr516Q8VFZ5 314 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ugt2b38Q91WH2 530 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ccdc167Q9D162 97 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam96bQ9D187 163 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Txnrd2Q9JLT4 524 aa9.82□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adh6bA0A1D5RMB0 384 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmsb15aA2AEH9 79 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm13212B1ASQ7 799 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 5830473C10RikF8VQ07 620 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rhox2hK7N6P1 191 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Csnk2a2O54833 350 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 UradQ283N4 178 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1252Q7TQZ2 314 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc36a2Q8BHK3 478 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Uhrf1Q8VDF2 782 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pafah2Q8VDG7 390 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pqbp1Q91VJ5 263 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc15a4Q91W98 574 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lpar3Q9EQ31 354 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tsc22d4Q9EQN3 387 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc25a25A2ASZ8 469 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cyp2w1E9Q816 493 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rem1O35929 297 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rbbp9O88851 186 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Grb7Q03160 535 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc23a3Q60850 611 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ces2bQ6PDB7 556 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Wipi2Q80W47 445 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gen1Q8BMI4 908 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdc123Q8CII2 336 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm42417Q8K1D0 126 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr599Q8VG01 315 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Oas1hQ8VI97 369 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Yipf2Q99LP8 312 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Npm3Q9CPP0 175 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1366A0A1W2P740 328 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tbc1d25A1A5B6 742 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn2r102L7N279 857 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Il6P08505 211 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Il6stQ00560 917 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Col6a2Q02788 1034 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tex10Q3URQ0 928 aaKnown RBP9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PtprrQ62132 656 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Wfikkn2Q7TQN3 571 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cxcl16Q8BSU2 246 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mpp7Q8BVD5 576 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 GrpQ8R1I2 146 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Twist2Q9D030 160 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1253A2AUA2 318 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm10608E9PZ13 166 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm10722F6VLK5 217 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1022L7MTT3 315 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Has1Q61647 583 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sec24dQ6NXL1 1032 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1251Q7TQZ3 318 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 TipinQ91WA1 278 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mat2bQ99LB6 334 aa9.81□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Chmp1b2Q9CQD4 199 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms