RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 NAALAD2Q9Y3Q0 740 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 COPG1Q9Y678 874 aaKnown RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SLC22A7Q9Y694 548 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 A0A0A6YYC8 382 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF860A6NHJ4 632 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 I3L1I5 382 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 FCHO1O14526 889 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 DKK1O94907 266 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SMIM10L1P0DMW3 83 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SDC1P18827 310 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ATP5A1P25705 553 aaKnown RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 TPP2P29144 1249 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 ARFIP1P53367 373 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 MAPK12P53778 367 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 MTTPP55157 894 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 UBAP2LQ14157 1087 aaKnown RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 IL11RAQ14626 422 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 GSTA3Q16772 222 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 GARNL3Q5VVW2 1013 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 GALNT18Q6P9A2 607 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 AMER3Q8N944 861 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 OR9A4Q8NGU2 314 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 C11orf24Q96F05 449 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SMIM10Q96HG1 83 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 TSSK3Q96PN8 268 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 LRRC37BQ96QE4 947 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 DDX31Q9H8H2 851 aaKnown RBP16.59■□□□□ 0.25
PHGDH-230ENST00000641927 AIG1Q9NVV5 245 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 SLC39A1Q9NY26 324 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
PHGDH-230ENST00000641927 CFAP54Q96N23 3096 aa16.58■□□□□ 0.25
PHGDH-230ENST00000641927 H3BMH7 237 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SGK494L7N484 410 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SCRG1O75711 98 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 KLHL18O94889 574 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 JMJD7P0C870 316 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 PRPS2P11908 318 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 ITIH1P19827 911 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 TACR1P25103 407 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 TSFMP43897 325 aaKnown RBP16.58■□□□□ 0.24
PHGDH-230ENST00000641927 MAPK10P53779 464 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 MC2RQ01718 297 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SLAMF1Q13291 335 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 PTGR1Q14914 329 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 MIER2Q8N344 545 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 DTWD1Q8N5C7 304 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 METTL27Q8N6F8 245 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-230ENST00000641927 BMPERQ8N8U9 685 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 LIN37Q96GY3 246 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-230ENST00000641927 FCRL1Q96LA6 429 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SERINC2Q96SA4 455 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SAR1AQ9NR31 198 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 TXLNGQ9NUQ3 528 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 SIRT5Q9NXA8 310 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-230ENST00000641927 ARMCX1Q9P291 453 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 DHCR7Q9UBM7 475 aaKnown RBP16.58■□□□□ 0.24
PHGDH-230ENST00000641927 ADAM29Q9UKF5 820 aa16.58■□□□□ 0.24
PHGDH-230ENST00000641927 CCDC187A0A096LP49 1063 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 A0A0A6YYD5 115 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 FAM149AA5PLN7 773 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 B3GALT2O43825 422 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 GALR3O60755 368 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-230ENST00000641927 MED26O95402 600 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ACPPP15309 386 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 AVPR1BP47901 424 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ARSFP54793 590 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 EMP3P54852 163 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 SKP1P63208 163 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 OLR1P78380 273 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ZNF763Q0D2J5 394 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 FAM53BQ14153 422 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 SQLEQ14534 574 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 SLC9A5Q14940 896 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 PWWP2BQ6NUJ5 590 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 BPHLQ86WA6 291 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-230ENST00000641927 PDSS2Q86YH6 399 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ARHGEF39Q8N4T4 335 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 GFM2Q969S9 779 aaKnown RBP16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-230ENST00000641927 FBXO8Q9NRD0 319 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 ASIC5Q9NY37 505 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 PISDQ9UG56 409 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 FBXW2Q9UKT8 454 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 GPR45Q9Y5Y3 372 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 SPTBP11277 2137 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 SCN3AQ9NY46 2000 aa16.57■□□□□ 0.24
PHGDH-230ENST00000641927 DCDC2BA2VCK2 349 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 B4E171 279 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TMPRSS11DO60235 418 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 LRATO95237 230 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TIAF1O95411 115 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 FAM58BPP0C7Q3 252 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 FGF5P12034 268 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 SDHBP21912 280 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TSPAN7P41732 249 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TAS2R50P59544 299 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 C3orf38Q5JPI3 329 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms