RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ZRSR2Q15696 482 aaKnown RBP25.17■■□□□ 1.62
VEGFA-231ENST00000640499 NIPAL1Q6NVV3 410 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 LETMD1Q6P1Q0 360 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 ZYG11AQ6WRX3 759 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF793Q6ZN11 406 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 FDCSPQ8NFU4 85 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 L3HYPDHQ96EM0 354 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 FER1L6-AS2Q96M78 137 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 MTERF1Q99551 399 aaKnown RBP25.17■■□□□ 1.62
VEGFA-231ENST00000640499 OR51B5Q9H339 312 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 CLK4Q9HAZ1 481 aaKnown RBP25.17■■□□□ 1.62
VEGFA-231ENST00000640499 RRAGDQ9NQL2 400 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-231ENST00000640499 DMRT3Q9NQL9 472 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 GRID1Q9ULK0 1009 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 COPEO14579 308 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 CDC123O75794 336 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-231ENST00000640499 ETHE1O95571 254 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 COX6A1P12074 109 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 IL10P22301 178 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 PIK3CBP42338 1070 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 DDX39BQ13838 428 aaKnown RBP25.16■■□□□ 1.62
VEGFA-231ENST00000640499 DEPDC1Q5TB30 811 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF843Q8N446 348 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 TRPC4APQ8TEL6 797 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 ATP6V1E2Q96A05 226 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 TBC1D20Q96BZ9 403 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 OR1F2PQ96R84 312 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 SLC25A18Q9H1K4 315 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF71Q9NQZ8 489 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-231ENST00000640499 MKS1Q9NXB0 559 aa25.16■■□□□ 1.62
VEGFA-231ENST00000640499 DOCK10Q96BY6 2186 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 A6NL46 340 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 MAGEB17A8MXT2 336 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 SAP18O00422 153 aaKnown RBP25.15■■□□□ 1.62
VEGFA-231ENST00000640499 RTCAO00442 366 aaKnown RBP25.15■■□□□ 1.62
VEGFA-231ENST00000640499 SUPT7LO94864 414 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 FHP07954 510 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 SERPINB1P30740 379 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 RRADP55042 308 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 SOX8P57073 446 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 RPS13P62277 151 aaKnown RBP25.15■■□□□ 1.62
VEGFA-231ENST00000640499 MINDY4Q4G0A6 757 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 KHDRBS2Q5VWX1 349 aaKnown RBP25.15■■□□□ 1.62
VEGFA-231ENST00000640499 LANCL3Q6ZV70 420 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 MILR1Q7Z6M3 343 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 PLPP5Q8NEB5 264 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 CMTM7Q96FZ5 175 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 NUDT9Q9BW91 350 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 SORBS1Q9BX66 1292 aaKnown RBP25.15■■□□□ 1.62
VEGFA-231ENST00000640499 ADGRE2Q9UHX3 823 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 TP53TG5Q9Y2B4 290 aa25.15■■□□□ 1.62
VEGFA-231ENST00000640499 IGHV1-45A0A0A0MS14 117 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 SFTPCP11686 197 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 ACPPP15309 386 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 CERS1P27544 350 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 SKP1P63208 163 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 BTG2P78543 158 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 CCDC153Q494R4 210 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 GGTA1PQ4G0N0 100 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 TMEM35AQ53FP2 167 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 TRIM40Q6P9F5 258 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 SLC22A9Q8IVM8 553 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 SRRM1Q8IYB3 904 aaKnown RBP25.14■■□□□ 1.62
VEGFA-231ENST00000640499 TMEM52Q8NDY8 209 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 TSLPQ969D9 159 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 ZBTB9Q96C00 473 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 MTFMTQ96DP5 389 aaKnown RBP25.14■■□□□ 1.62
VEGFA-231ENST00000640499 FAR2Q96K12 515 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 ZIM3Q96PE6 472 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 NPLQ9BXD5 320 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF717Q9BY31 904 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-231ENST00000640499 GSTO2Q9H4Y5 243 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 KCMF1Q9P0J7 381 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 PLLPQ9Y342 182 aa25.14■■□□□ 1.62
VEGFA-231ENST00000640499 COL6A6A6NMZ7 2263 aa25.14■■□□□ 1.61
VEGFA-231ENST00000640499 MKRN2OSH3BPM6 223 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 HPP00738 406 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 C8orf89P0DMQ9 161 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 MYL2P10916 166 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 ATP5A1P25705 553 aaKnown RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 EEF1A2Q05639 463 aaKnown RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 PCOLCEQ15113 449 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 TUBB8Q3ZCM7 444 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 TCTN3Q6NUS6 607 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 C9orf43Q8TAL5 461 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 APOPT1Q96IL0 206 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 SERINC2Q96SA4 455 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 WDR77Q9BQA1 342 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 ATP13A2Q9NQ11 1180 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 FARSBQ9NSD9 589 aaKnown RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 PSD3Q9NYI0 1048 aa25.13■■□□□ 1.61
VEGFA-231ENST00000640499 PCDHGA9Q9Y5G4 932 aaKnown RBP25.13■■□□□ 1.61
VEGFA-231ENST00000640499 IGHV3-20A0A0C4DH32 117 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 FOXE1O00358 373 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-231ENST00000640499 UBFD1O14562 309 aaKnown RBP25.12■■□□□ 1.61
VEGFA-231ENST00000640499 B4GALT2O60909 372 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 SPAG7O75391 227 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 OR4F21O95013 312 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 SCELO95171 688 aa25.12■■□□□ 1.61
VEGFA-231ENST00000640499 OTCP00480 354 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms