RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 GDF5P43026 501 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 HNMTP50135 292 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 HLCSP50747 726 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 MGAT5Q09328 741 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 TSNQ15631 228 aaKnown RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 C18orf21Q32NC0 220 aaPredicted RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 NCCRP1Q6ZVX7 275 aaPredicted RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 GDF7Q7Z4P5 450 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 CEP97Q8IW35 865 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 CHERPQ8IWX8 916 aaKnown RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 ARMC10Q8N2F6 343 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 GHDCQ8N2G8 530 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 APCDD1LQ8NCL9 501 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 FBXO36Q8NEA4 188 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 DEFB126Q9BYW3 111 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 KCNF1Q9H3M0 494 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 A0A0G2JN53 185 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 TRBV11-1A0A0K0K1C0 115 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 C19orf84I3L1E1 186 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 FCHO1O14526 889 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 MYO1DO94832 1006 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 WDR47O94967 919 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 GNAZP19086 355 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 HNRNPH1P31943 449 aaKnown RBP15.75■□□□□ 0.11
SMN2-216ENST00000638794 SLC6A12P48065 614 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 BTN3A2P78410 334 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 PDIA2Q13087 525 aaKnown RBP15.75■□□□□ 0.11
SMN2-216ENST00000638794 SLCO4C1Q6ZQN7 724 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 FRA10AC1Q70Z53 315 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 ADAMTSL2Q86TH1 951 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 B3GNT7Q8NFL0 401 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 AGAP11Q8TF27 550 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 GAL3ST3Q96A11 431 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 TMEM125Q96AQ2 219 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 RHBDF1Q96CC6 855 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 MOCS1Q9NZB8 636 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 CTNNAL1Q9UBT7 734 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 MMACHCQ9Y4U1 282 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 CELSR1Q9NYQ6 3014 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 POLQO75417 2590 aa15.75■□□□□ 0.11
SMN2-216ENST00000638794 CLDN14O95500 239 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 C1GALT1C1LP0DN25 315 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 MEOX1P50221 254 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 STXBP1P61764 594 aaKnown RBP15.74■□□□□ 0.11
SMN2-216ENST00000638794 RUNX2Q13950 521 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 SLBPQ14493 270 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMN2-216ENST00000638794 TMIGD1Q6UXZ0 262 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 C3P1Q6ZMU1 363 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 FGD2Q7Z6J4 655 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 DOLPP1Q86YN1 238 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 SCUBE1Q8IWY4 988 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 KLHDC8AQ8IYD2 350 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 CCT6BQ92526 530 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 MS4A6EQ96DS6 147 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 VPS39Q96JC1 886 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 FAR2Q96K12 515 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 RUNDC3BQ96NL0 473 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 MCMBPQ9BTE3 642 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 TRIM8Q9BZR9 551 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 RHOJQ9H4E5 214 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 GPAMQ9HCL2 828 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 ASB1Q9Y576 335 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 CLDN16Q9Y5I7 305 aa15.74■□□□□ 0.11
SMN2-216ENST00000638794 LRIT2A6NDA9 550 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 NCF1BA6NI72 391 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 USP27XA6NNY8 438 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 NCF1CA8MVU1 366 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 E7ESA3 106 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 TGFBR3LH3BV60 316 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 ERI3O43414 337 aaKnown RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 H2AFYO75367 372 aaKnown RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 PIAS1O75925 651 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 NCF1P14598 390 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 PPP2R1BP30154 601 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 PTGER1P34995 402 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 RFC3P40938 356 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 CLCN2P51788 898 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 HNRNPFP52597 415 aaKnown RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 TERF2Q15554 542 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 TGFBIQ15582 683 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 POGLUT1Q8NBL1 392 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 TMEM52Q8NDY8 209 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 TTLQ8NG68 377 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 MTFMTQ96DP5 389 aaKnown RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 NPLQ9BXD5 320 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 POPDC3Q9HBV1 291 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 PRTFDC1Q9NRG1 225 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 PNO1Q9NRX1 252 aaKnown RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 ZNF223Q9UK11 482 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 FBXW2Q9UKT8 454 aa15.73■□□□□ 0.11
SMN2-216ENST00000638794 KLF13Q9Y2Y9 288 aaPredicted RBP15.73■□□□□ 0.11
SMN2-216ENST00000638794 PRRG2O14669 202 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 ADAM10O14672 748 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 TFECO14948 347 aaPredicted RBP15.72■□□□□ 0.11
SMN2-216ENST00000638794 ITGA10O75578 1167 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms