RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 GCNT7Q6ZNI0 430 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FAM83HQ6ZRV2 1179 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CALHM3Q86XJ0 350 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 EID3Q8N140 333 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 C1orf52Q8N6N3 182 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ATG16L2Q8NAA4 619 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 AVL9Q8NBF6 648 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TP53I13Q8NBR0 393 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF548Q8NEK5 533 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 OR14C36Q8NHC7 312 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SMPDL3AQ92484 453 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FAM131CQ96AQ9 280 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 C11orf24Q96F05 449 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 REXO5Q96IC2 774 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RNF145Q96MT1 663 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 AIF1LQ9BQI0 150 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DUSP26Q9BV47 211 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RAB11FIP5Q9BXF6 653 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 EBPLQ9BY08 206 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SLC17A9Q9BYT1 436 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 B3GNT4Q9C0J1 378 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 NT5DC2Q9H857 520 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZDHHC4Q9NPG8 344 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 OLAHQ9NV23 265 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SLC25A37Q9NYZ2 338 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 NDUFA13Q9P0J0 144 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CIDEBQ9UHD4 219 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 WBP11Q9Y2W2 641 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TDRKHQ9Y2W6 561 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MYO9BQ13459 2157 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 LRRK1Q38SD2 2015 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DOCK8Q8NF50 2099 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ANHXE9PGG2 379 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CLOCKO15516 846 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PCDH7O60245 1069 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RNGTTO60942 597 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF254O75437 659 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RASAL1O95294 804 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PAK4O96013 591 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 HOXC4P09017 264 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ERGP11308 486 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 OXTRP30559 389 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MRPS21P82921 87 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TXNL4AP83876 142 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 GRSF1Q12849 480 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 IRF4Q15306 451 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ADRM1Q16186 407 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 NRF1Q16656 503 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 UGT8Q16880 541 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 LEXMQ3ZCV2 418 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CATSPEREQ5SY80 951 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 C6orf52Q5T4I8 152 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZCCHC12Q6PEW1 402 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 XKR5Q6UX68 686 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 TMIGD1Q6UXZ0 262 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SERPINA11Q86U17 422 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 HORMAD1Q86X24 394 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MSRB3Q8IXL7 192 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 OR5AR1Q8NGP9 310 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 NUDT8Q8WV74 236 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 NKD1Q969G9 470 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 GFM2Q969S9 779 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 COQ8BQ96D53 544 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MTERF3Q96E29 417 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 EGLN2Q96KS0 407 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CNBD2Q96M20 576 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PANX1Q96RD7 426 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SEPHS2Q99611 448 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CENPKQ9BS16 269 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 RPP25Q9BUL9 199 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 REXO4Q9GZR2 422 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MAGIXQ9H6Y5 334 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DMRT3Q9NQL9 472 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 MBNL1Q9NR56 388 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FAM86C1Q9NVL1 165 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 CLDND1Q9NY35 253 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 SLC23A2Q9UGH3 650 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ATP6V1HQ9UI12 483 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 FZD4Q9ULV1 537 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 ZFR2Q9UPR6 939 aaKnown RBP6.86□□□□□ -1.31
BRCA1-230ENST00000634433 AP1M2Q9Y6Q5 423 aa6.86□□□□□ -1.31
BRCA1-230ENST00000634433 A0A1W2PQU0 124 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ANKDD1BA6NHY2 528 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 SAC3D1A6NKF1 404 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 EIF4E1BA6NMX2 242 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 STMND1H3BQB6 276 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CLIC1O00299 241 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 TPST1O60507 370 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CREG1O75629 220 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 ACSL1P33121 698 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CCR8P51685 355 aa6.85□□□□□ -1.31
BRCA1-230ENST00000634433 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 RAE1P78406 368 aaKnown RBP6.85□□□□□ -1.31
BRCA1-230ENST00000634433 CTBSQ01459 385 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms