RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 BTN3A2P78410 334 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 MSS51Q4VC12 460 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 HP1BP3Q5SSJ5 553 aaPredicted RBP17.71■□□□□ 0.43
SMN1-211ENST00000625245 TEDDM1Q5T9Z0 273 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 NXPE4Q6UWF7 544 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 IGDCC3Q8IVU1 814 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 LRRC8AQ8IWT6 810 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 CNTN4Q8IWV2 1026 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 CYP4Z2PQ8N1L4 340 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 CA13Q8N1Q1 262 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 B3GNT7Q8NFL0 401 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 CFAP36Q96G28 342 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 PELI2Q9HAT8 420 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 MCCC2Q9HCC0 563 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 IKZF3Q9UKT9 509 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 SLC22A14Q9Y267 594 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 ZNF407Q9C0G0 2248 aa17.71■□□□□ 0.43
SMN1-211ENST00000625245 CELSR1Q9NYQ6 3014 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 HIVEP1P15822 2718 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 GOLGA6L10A0A0M3HER8 536 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 SMIM10L1P0DMW3 83 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 TFEBP19484 476 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 SAT1P21673 171 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 FAM45BPQ6NSW5 357 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 SBSNQ6UWP8 590 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 FAM45AQ8TCE6 357 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 SMIM10Q96HG1 83 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 FAR2Q96K12 515 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 KCNE2Q9Y6J6 123 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 DNAJC13O75165 2243 aa17.7■□□□□ 0.42
SMN1-211ENST00000625245 HCFC1P51610 2035 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 A0A0G2JN53 185 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 USP27XA6NNY8 438 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 C4orf51C9J302 202 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 DNALI1O14645 258 aaPredicted RBP17.69■□□□□ 0.42
SMN1-211ENST00000625245 ITGA10O75578 1167 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 SERPINA6P08185 405 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 FNTAP49354 379 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 TMEM211Q6ICI0 200 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 MDGA2Q7Z553 956 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 GALNT7Q86SF2 657 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 APCDD1LQ8NCL9 501 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 CREB3L4Q8TEY5 395 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 CCT6BQ92526 530 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 EGFL8Q99944 293 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 CCDC77Q9BR77 488 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 DEFB127Q9H1M4 99 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 PRTFDC1Q9NRG1 225 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 ERVK-11Q9UQG0 969 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 MMACHCQ9Y4U1 282 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 HRH3Q9Y5N1 445 aa17.69■□□□□ 0.42
SMN1-211ENST00000625245 EML6Q6ZMW3 1958 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 FAM90A27PA6NNH2 459 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 CDC7O00311 574 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 FANCGO15287 622 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 H2AFYO75367 372 aaKnown RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 STXBP1P61764 594 aaKnown RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 CCZ1BP86790 482 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 CCZ1P86791 482 aaPredicted RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 CMPK2Q5EBM0 449 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 ARMC10Q8N2F6 343 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 MARVELD2Q8N4S9 558 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 OR52N2Q8NGI0 321 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 C16orf52Q8NHV5 167 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 ASB5Q8WWX0 329 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 SREK1Q8WXA9 508 aaKnown RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 NCLNQ969V3 563 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 VMP1Q96GC9 406 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 PDLIM5Q96HC4 596 aaKnown RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 AICDAQ9GZX7 198 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 TIMMDC1Q9NPL8 285 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 KCMF1Q9P0J7 381 aa17.68■□□□□ 0.42
SMN1-211ENST00000625245 CORO1CQ9ULV4 474 aaPredicted RBP17.68■□□□□ 0.42
SMN1-211ENST00000625245 NKX2-6A6NCS4 301 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 NPEPPSL1A6NEC2 478 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 PPP2R1BP30154 601 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 ELK3P41970 407 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 SSR4P51571 173 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 SLC13A2Q13183 592 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 RUNX2Q13950 521 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 TRMT10BQ6PF06 316 aaKnown RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 C16orf47Q6ZP98 133 aaPredicted RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMN1-211ENST00000625245 ZFP62Q8NB50 900 aaPredicted RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 ACBD4Q8NC06 268 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 UCK2Q9BZX2 261 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 LIN28AQ9H9Z2 209 aaKnown RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 PLAC1Q9HBJ0 212 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 ZNF223Q9UK11 482 aaPredicted RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 CHMP2BQ9UQN3 213 aa17.67■□□□□ 0.42
SMN1-211ENST00000625245 PHF3Q92576 2039 aaKnown RBP17.67■□□□□ 0.42
SMN1-211ENST00000625245 CLDN4O14493 209 aa17.66■□□□□ 0.42
SMN1-211ENST00000625245 ERI3O43414 337 aaKnown RBP17.66■□□□□ 0.42
SMN1-211ENST00000625245 ZFAND5O76080 213 aa17.66■□□□□ 0.42
SMN1-211ENST00000625245 WDR47O94967 919 aa17.66■□□□□ 0.42
SMN1-211ENST00000625245 TUBB4AP04350 444 aa17.66■□□□□ 0.42
SMN1-211ENST00000625245 PLGLB1Q02325 96 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms