RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 BTN3A2P78410 334 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ZFP36L1Q07352 338 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF763Q0D2J5 394 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF793Q6ZN11 406 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 EGLN2Q96KS0 407 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 TMEM74Q96NL1 305 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 DPY30Q9C005 99 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 FGF21Q9NSA1 209 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 CCDC167Q9P0B6 97 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ANKRD28O15084 1053 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 LRATO95237 230 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 HIST1H1TP22492 207 aaPredicted RBP16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ATP5A1P25705 553 aaKnown RBP16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 CERS1P27544 350 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 TSFMP43897 325 aaKnown RBP16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ASMTP46597 345 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 PDX1P52945 283 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ACY1Q03154 408 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 GRM7Q14831 915 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 DEFB134Q4QY38 66 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 AMER3Q8N944 861 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ACOT4Q8N9L9 421 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 TTC29Q8NA56 475 aaPredicted RBP16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 OR1L3Q8NH93 324 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 PROKR1Q8TCW9 393 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 C16orf78Q8WTQ4 265 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 TEX37Q96LM6 180 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ROGDIQ9GZN7 287 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ACTL8Q9H568 366 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 ARL8BQ9NVJ2 186 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 SERTAD3Q9UJW9 196 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 PCDHGA1Q9Y5H4 931 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 SLC22A7Q9Y694 548 aa16.92■□□□□ 0.3
PTCHD3-202ENST00000622555 GVINP1Q7Z2Y8 2422 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 CROCCQ5TZA2 2017 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 A0A088AWK7 358 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 A0A0A6YYD5 115 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 HYKKA2RU49 373 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 C9JVG2 144 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 SMIM10L1P0DMW3 83 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 CD1EP15812 388 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 PCSK2P16519 638 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 IL1RNP18510 177 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF10P21506 573 aaPredicted RBP16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 JAK1P23458 1154 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 CSTF2P33240 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 MTTPP55157 894 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 ITGA1P56199 1179 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 CLDN8P56748 225 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 ELF3P78545 371 aaPredicted RBP16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 FOXM1Q08050 763 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 KRT72Q14CN4 511 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 HERC3Q15034 1050 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 GK5Q6ZS86 529 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 GLRX5Q86SX6 157 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 GPR135Q8IZ08 494 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 KRTCAP2Q8N6L1 136 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 GFM2Q969S9 779 aaKnown RBP16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 KLHL29Q96CT2 875 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF501Q96CX3 271 aaPredicted RBP16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 SMIM10Q96HG1 83 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 ZBTB18Q99592 522 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 KIF26BQ2KJY2 2108 aa16.91■□□□□ 0.3
PTCHD3-202ENST00000622555 FITM1A5D6W6 292 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 AKAP10O43572 662 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 TMPRSS11DO60235 418 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 MGRN1O60291 552 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 KLHL18O94889 574 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 CBX6O95503 412 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 TAS2R50P59544 299 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 INSM1Q01101 510 aaPredicted RBP16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 SLAMF1Q13291 335 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 SLC9A5Q14940 896 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 C16orf72Q14CZ0 275 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 CYB5D1Q6P9G0 228 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 KIAA2013Q8IYS2 634 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 ZCCHC7Q8N3Z6 543 aaKnown RBP16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 ARHGEF39Q8N4T4 335 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 POU5F2Q8N7G0 328 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 AGBL5Q8NDL9 886 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 C10orf90Q96M02 699 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 OR6C1Q96RD1 312 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 LRMDAQ9H2I8 198 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 ANKHQ9HCJ1 492 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 MYNNQ9NPC7 610 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 RAPGEFL1Q9UHV5 662 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 LOC100653049A0A140TA62 436 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 H3BMH7 237 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 NR5A2O00482 541 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 B3GALT2O43825 422 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 KRT34O76011 436 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 SCELO95171 688 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 FAM58BPP0C7Q3 252 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 IL12AP29459 219 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 CLNS1AP54105 237 aaKnown RBP16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 KCNJ2P63252 427 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 MAPRE2Q15555 327 aa16.9■□□□□ 0.3
PTCHD3-202ENST00000622555 GARNL3Q5VVW2 1013 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms