RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PCNAP12004 261 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 IL10P22301 178 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 JAK1P23458 1154 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 HPDP32754 393 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 DCTP40126 519 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 SLC29A2Q14542 456 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 ABRAXAS2Q15018 415 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 HIST2H2ACQ16777 129 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 LGSNQ5TDP6 509 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 AGAP7PQ5VUJ5 663 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 SLC6A19Q695T7 634 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 HIST2H2AA3Q6FI13 130 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 TRIM40Q6P9F5 258 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 KBTBD2Q8IY47 623 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 RBMXL3Q8N7X1 1067 aaKnown RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 PTGR2Q8N8N7 351 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 TSLPQ969D9 159 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 MS4A6EQ96DS6 147 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 FAR2Q96K12 515 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 AGAP4Q96P64 663 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 ZNF700Q9H0M5 742 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 RHBGQ9H310 441 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 ZBTB20Q9HC78 741 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 LANCL2Q9NS86 450 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 MAP10Q9P2G4 905 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 PSMC3IPQ9P2W1 217 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 ZNF490Q9ULM2 529 aaPredicted RBP15.06■□□□□ 0
BRCA1-228ENST00000618469 CELSR2Q9HCU4 2923 aa15.06■□□□□ 0
BRCA1-228ENST00000618469 A0A088AWK7 358 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 LRIT2A6NDA9 550 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PSMD12O00232 456 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 B4GALT2O60909 372 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 SORBS2O94875 1100 aaKnown RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 SIX3O95343 332 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 CLDN1O95832 211 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 TBX6O95947 436 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 RBP1P09455 135 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PRR35P0CG20 571 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 SMIM10L1P0DMW3 83 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 COL6A2P12110 1019 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 RNH1P13489 461 aaKnown RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 ZNF10P21506 573 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 TNFRSF8P28908 595 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PLA2G16P53816 162 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 BTN3A2P78410 334 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 RHAGQ02094 409 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 E2F2Q14209 437 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 GRHL2Q6ISB3 625 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 JMJD6Q6NYC1 403 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 MED27Q6P2C8 311 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 ADGRD1Q6QNK2 874 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 GOLGA7Q7Z5G4 137 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 CPEB2Q7Z5Q1 589 aaKnown RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 ANKRD37Q7Z713 158 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 CA13Q8N1Q1 262 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 EIF1ADQ8N9N8 165 aaKnown RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 OR2L5Q8NG80 312 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PRR7Q8TB68 274 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 UBLCP1Q8WVY7 318 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 UBE2E3Q969T4 207 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PNPLA2Q96AD5 504 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 MTBPQ96DY7 904 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 PHF21BQ96EK2 531 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 SMIM10Q96HG1 83 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 TUBB6Q9BUF5 446 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 ACTR8Q9H981 624 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 COPS7BQ9H9Q2 264 aaPredicted RBP15.05■□□□□ -0
BRCA1-228ENST00000618469 HIVEP3Q5T1R4 2406 aa15.05■□□□□ -0
BRCA1-228ENST00000618469 SCN2AQ99250 2005 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 IQANK1A0A1B0GTG1 560 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 SMIM24O75264 130 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 WFS1O76024 890 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 SERPINA7P05543 415 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 CERS1P27544 350 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 EEF1DP29692 281 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 ARL1P40616 181 aaPredicted RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 CASP2P42575 452 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 PIK3CGP48736 1102 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 DDX39BQ13838 428 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 GTF2H2Q13888 395 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -02e-7■■■□□ 17.1
BRCA1-228ENST00000618469 NSDHLQ15738 373 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 ADPRMQ3LIE5 342 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 GTF2H2CQ6P1K8 395 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 LINC00696Q6ZRV3 163 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 ZADH2Q8N4Q0 377 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 SIRT6Q8N6T7 355 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 BRIX1Q8TDN6 353 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 ZNF473Q8WTR7 871 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 MS4A8Q9BY19 250 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 ILKAPQ9H0C8 392 aaPredicted RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 EPS8L2Q9H6S3 715 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 SLAMF7Q9NQ25 335 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 TMCO1Q9UM00 188 aa15.04■□□□□ -0
BRCA1-228ENST00000618469 TNPO3Q9Y5L0 923 aaKnown RBP15.04■□□□□ -0
BRCA1-228ENST00000618469 CPAMD8Q8IZJ3 1885 aa15.03■□□□□ -0
BRCA1-228ENST00000618469 MAGEB17A8MXT2 336 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms