RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RNF11Q9Y3C5 154 aa14.11□□□□□ -0.15
UBXN1-218ENST00000616865 PCDHGA11Q9Y5H2 935 aa14.11□□□□□ -0.15
UBXN1-218ENST00000616865 KLK4Q9Y5K2 254 aa14.11□□□□□ -0.15
UBXN1-218ENST00000616865 ANKDD1BA6NHY2 528 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 KLF7O75840 302 aaPredicted RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 CBX6O95503 412 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 CHEK2O96017 543 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 ENO1P06733 434 aaKnown RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 BST1Q10588 318 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 IFT88Q13099 833 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 TRAF3Q13114 568 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 ZIC1Q15915 447 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 DEFB110Q30KQ9 67 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 PLEKHN1Q494U1 663 aaPredicted RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 MCATQ8IVS2 390 aaKnown RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 ZNF655Q8N720 491 aaPredicted RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 CDYL2Q8N8U2 506 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 L3MBTL4Q8NA19 623 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 TTLQ8NG68 377 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 METTL6Q8TCB7 284 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 AGAP11Q8TF27 550 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 CKAP2Q8WWK9 683 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 CCT6BQ92526 530 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 THAP11Q96EK4 314 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 WDR34Q96EX3 536 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 IP6K3Q96PC2 410 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 C17orf62Q9BQA9 187 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 ELOVL6Q9H5J4 265 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 NT5DC2Q9H857 520 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 SNX6Q9UNH7 406 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 B3GNT3Q9Y2A9 372 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 FIS1Q9Y3D6 152 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 DOPEY1Q5JWR5 2465 aa14.1□□□□□ -0.15
UBXN1-218ENST00000616865 PRRC2CQ9Y520 2896 aaKnown RBP14.1□□□□□ -0.15
UBXN1-218ENST00000616865 PPP6CO00743 305 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 FFAR3O14843 346 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 GPR42O15529 346 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CTSVO60911 334 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 WFS1O76024 890 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 ESRRBO95718 433 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 KRT6AP02538 564 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 KRT6BP04259 564 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 ALPPP05187 535 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 EIF2S1P05198 315 aaKnown RBP14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CHRNGP07510 517 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 KRT6CP48668 564 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 VSX2P58304 361 aaPredicted RBP14.09□□□□□ -0.15
UBXN1-218ENST00000616865 RELAQ04206 551 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
UBXN1-218ENST00000616865 MYBPC3Q14896 1274 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 ZRSR2Q15696 482 aaKnown RBP14.09□□□□□ -0.15
UBXN1-218ENST00000616865 DCAF10Q5QP82 559 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 SH2D4BQ5SQS7 431 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 LETMD1Q6P1Q0 360 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 IGFL3Q6UXB1 125 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 RNF44Q7L0R7 432 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CUZD1Q86UP6 607 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 HOMEZQ8IX15 550 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 GPR135Q8IZ08 494 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 KIRREL3Q8IZU9 778 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 GALNT16Q8N428 558 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 DNAJC22Q8N4W6 341 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 MFSD9Q8NBP5 474 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CLEC1AQ8NC01 280 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 ZNF740Q8NDX6 193 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 TRPV3Q8NET8 790 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 AGR3Q8TD06 166 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 FER1L6-AS2Q96M78 137 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 C5orf34Q96MH7 638 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CHRNA10Q9GZZ6 450 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 ILKAPQ9H0C8 392 aaPredicted RBP14.09□□□□□ -0.15
UBXN1-218ENST00000616865 FAM60AQ9NP50 221 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 THAP1Q9NVV9 213 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 SLC5A6Q9Y289 635 aa14.09□□□□□ -0.15
UBXN1-218ENST00000616865 CRYBG3Q68DQ2 2970 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 H3BMH7 237 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 UBFD1O14562 309 aaKnown RBP14.08□□□□□ -0.16
UBXN1-218ENST00000616865 POLR3GO15318 223 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-218ENST00000616865 ITM2AO43736 263 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 NRP2O60462 931 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 SRPX2O60687 465 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-218ENST00000616865 PRAMEF4O60810 478 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 LYPLA1O75608 230 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-218ENST00000616865 UROSP10746 265 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 GSTM2P28161 218 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 SERPINB1P30740 379 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 AHRP35869 848 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 BCL6P41182 706 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 FOLR3P41439 243 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 RGS1Q08116 209 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 GALNT1Q10472 559 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-218ENST00000616865 SSPNQ14714 243 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 GGTA1PQ4G0N0 100 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 SGO1Q5FBB7 561 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 PRAMEF9Q5VWM5 478 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 MLIPQ5VWP3 458 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 RHBDD2Q6NTF9 364 aa14.08□□□□□ -0.16
UBXN1-218ENST00000616865 FBXO42Q6P3S6 717 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms