RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TMBIM1Q969X1 311 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 TM4SF18Q96CE8 201 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 FBXL20Q96IG2 436 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SH3GL1Q99961 368 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 MS4A8Q9BY19 250 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 VCXQ9H320 206 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PRO3102Q9H379 93 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 IL21RQ9HBE5 538 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 LHX9Q9NQ69 397 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 AGPAT4Q9NRZ5 378 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 WSB2Q9NYS7 404 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 TAAR2Q9P1P5 351 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PADI4Q9UM07 663 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SCML1Q9UN30 329 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 FAF1Q9UNN5 650 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 COLEC10Q9Y6Z7 277 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 KIAA1549LQ6ZVL6 1849 aa3.28□□□□□ -1.89
LIG4-205ENST00000614526 SEC16AO15027 2179 aa3.28□□□□□ -1.89
LIG4-205ENST00000614526 LOC105369274A0A096LPK9 316 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 LOC102723532A0A0G2JNH3 316 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 LRIT2A6NDA9 550 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CLOCKO15516 846 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 HCRTR1O43613 425 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 NDUFS2O75306 463 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 TNFP01375 233 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 F3P13726 295 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 HSD3B1P14060 373 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 JUNDP17535 347 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CXCR2P25025 360 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 HSD3B2P26439 372 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CD6P30203 668 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GPC1P35052 558 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 BSGP35613 385 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 POLR2IP36954 125 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 PIK3CBP42338 1070 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GSSP48637 474 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CSNK1EP49674 416 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 MAZP56270 477 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 POLE2P56282 527 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 RPL6Q02878 288 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 DMPKQ09013 629 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 LRRC74AQ0VAA2 488 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 MTAPQ13126 283 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 EIF2B5Q13144 721 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 ARHGAP19Q14CB8 494 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 SMAD2Q15796 467 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 SPDYE7PQ495Y7 208 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 DEFB134Q4QY38 66 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 LRIF1Q5T3J3 769 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 KIAA0895LQ68EN5 471 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR4C11Q6IEV9 310 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 FAM71E1Q6IPT2 247 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 IRGCQ6NXR0 463 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GALNT5Q7Z7M9 940 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CCDC116Q8IYX3 515 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 FAM9CQ8IZT9 166 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR4N4Q8N0Y3 316 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CHCHD4Q8N4Q1 142 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 DEFB123Q8N688 67 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 ABHD11Q8NFV4 315 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR8J2Q8NGG1 315 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR2L8Q8NGY9 312 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR52J3Q8NH60 311 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 SLC37A2Q8TED4 501 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GATA6Q92908 595 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 KLHDC7BQ96G42 594 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CENPNQ96H22 339 aaPredicted RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 MAGEB10Q96LZ2 347 aaPredicted RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 BARD1Q99728 777 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 ZNF717Q9BY31 904 aaPredicted RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 CXorf36Q9H7Y0 433 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CAPN10Q9HC96 672 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 TMEM74BQ9NUR3 256 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 EXD2Q9NVH0 621 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 ARMC1Q9NVT9 282 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GPATCH2Q9NW75 528 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 HRASLS2Q9NWW9 162 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 AHSPQ9NZD4 102 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 AASSQ9UDR5 926 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 APOBEC3BQ9UH17 382 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 SCOCQ9UIL1 159 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 DOLKQ9UPQ8 538 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 ATG4BQ9Y4P1 393 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 PLXND1Q9Y4D7 1925 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 NINQ8N4C6 2090 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 MAGEA13PA6NCF6 341 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 OR2W5A6NFC9 320 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GPR89AB7ZAQ6 455 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 PRAMEF26H0Y7S4 382 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CAPN5O15484 640 aaPredicted RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 CTSVO60911 334 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GPIP06744 558 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 GPR89BP0CG08 455 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 ERGP11308 486 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 FUT4P22083 530 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CMPK1P30085 196 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 LSSP48449 732 aa3.27□□□□□ -1.89
LIG4-205ENST00000614526 CDK9P50750 372 aaKnown RBP3.27□□□□□ -1.89
LIG4-205ENST00000614526 CCT8P50990 548 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms