RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 FAM83EQ2M2I3 478 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 ACER2Q5QJU3 275 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 SLC5A8Q8N695 610 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 OR2L5Q8NG80 312 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 RHEBL1Q8TAI7 183 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 ADAMTS18Q8TE60 1221 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 CCT6BQ92526 530 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 ESAMQ96AP7 390 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 ATOH8Q96SQ7 321 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 SLX1AQ9BQ83 275 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 REXO4Q9GZR2 422 aaKnown RBP17.1■□□□□ 0.33
VCX3A-203ENST00000612369 AICDAQ9GZX7 198 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 IGSF5Q9NSI5 407 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 OLAHQ9NV23 265 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 SLC5A6Q9Y289 635 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 MMACHCQ9Y4U1 282 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 PCDHGB6Q9Y5F9 930 aa17.1■□□□□ 0.33
VCX3A-203ENST00000612369 POLEQ07864 2286 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 SPTAN1Q13813 2472 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 IGKV3D-11A0A0A0MRZ8 115 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 TCRBV16S1A1N1A0A5B0 115 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 SYNDIG1LA6NDD5 238 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 SYCE1LA8MT33 242 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 C4orf51C9J302 202 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 E2F3O00716 465 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 CCNT2O60583 730 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 PRAMEF2O60811 474 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 HNRNPH1P31943 449 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 IRF8Q02556 426 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 PCDH1Q08174 1060 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 TGM3Q08188 693 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 GLE1Q53GS7 698 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 FBXO48Q5FWF7 155 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 TRIM40Q6P9F5 258 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 SRFBP1Q8NEF9 429 aaKnown RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 DNAJB8Q8NHS0 232 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 ELP5Q8TE02 316 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 UBTD2Q8WUN7 234 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 FUT8Q9BYC5 575 aa17.09■□□□□ 0.33
VCX3A-203ENST00000612369 ZNF490Q9ULM2 529 aaPredicted RBP17.09■□□□□ 0.33
VCX3A-203ENST00000612369 SPTBN1Q01082 2364 aaKnown RBP17.08■□□□□ 0.33
VCX3A-203ENST00000612369 K7EPI3 171 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 B3GALT2O43825 422 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 TBX6O95947 436 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 F10P00742 488 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 C2P06681 752 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 HSD17B7P56937 341 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 BTG2P78543 158 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 CHIT1Q13231 466 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 RCN2Q14257 317 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ACAP2Q15057 778 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 MROH9Q5TGP6 573 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ZNF324BQ6AW86 544 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 VN1R5Q7Z5H4 357 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 CRLF3Q8IUI8 442 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 BEST3Q8N1M1 668 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 AMER2Q8N7J2 671 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 EXT2Q93063 718 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 NXNL1Q96CM4 212 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 MAGEB10Q96LZ2 347 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 SERINC2Q96SA4 455 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ROGDIQ9GZN7 287 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ACSS3Q9H6R3 686 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 OPTCQ9UBM4 332 aa17.08■□□□□ 0.32
VCX3A-203ENST00000612369 ERRFI1Q9UJM3 462 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 MRPS33Q9Y291 106 aaKnown RBP17.08■□□□□ 0.32
VCX3A-203ENST00000612369 WIPF3A6NGB9 483 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 SAGE2PA6NJ88 616 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 SUPT3HB4E1H0 165 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 FAM227AF5H4B4 570 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CLDN4O14493 209 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 SUPT3HO75486 399 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 RASAL1O95294 804 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CRYABP02511 175 aaKnown RBP17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CTAGE8P0CG41 777 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 EPORP19235 508 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 SERPINB1P30740 379 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 MTTPP55157 894 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 RAB38P57729 211 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 RUNX2Q13950 521 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 TERF2Q15554 542 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 ABHD17CQ6PCB6 329 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CTAGE4Q8IX94 777 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 ZNF595Q8IYB9 648 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CENPLQ8N0S6 344 aaPredicted RBP17.07■□□□□ 0.32
VCX3A-203ENST00000612369 CYP4X1Q8N118 509 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 NR4A3Q92570 626 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 C5orf34Q96MH7 638 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 QRFPRQ96P65 431 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 TAAR6Q96RI8 345 aa17.07■□□□□ 0.32
VCX3A-203ENST00000612369 UTP23Q9BRU9 249 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms