RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 THOC6Q86W42 341 aaKnown RBP12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 CA13Q8N1Q1 262 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 FAM47BQ8NA70 645 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 OR4K1Q8NGD4 311 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 FAM57AQ8TBR7 257 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 FAR2Q96K12 515 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 PBKQ96KB5 322 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 NAP1L3Q99457 506 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 DEFB127Q9H1M4 99 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 LIN28AQ9H9Z2 209 aaKnown RBP12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 KCMF1Q9P0J7 381 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 IKZF3Q9UKT9 509 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 CHMP2BQ9UQN3 213 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 PPP2R2CQ9Y2T4 447 aa12.47□□□□□ -0.41
HMGB1P24-201ENST00000611897 IGKV3D-11A0A0A0MRZ8 115 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 G3V3Y1 287 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 ERI3O43414 337 aaKnown RBP12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 ITGA10O75578 1167 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 TTC4O95801 387 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 AHRP35869 848 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SSR4P51571 173 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 ZNF460Q14592 562 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 FRA10AC1Q70Z53 315 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 MDGA2Q7Z553 956 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 TMEM200AQ86VY9 491 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 CCDC71Q8IV32 467 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 MARVELD2Q8N4S9 558 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 POGLUT1Q8NBL1 392 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 TRPV3Q8NET8 790 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 NCLNQ969V3 563 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 CCDC77Q9BR77 488 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SARGQ9BW04 601 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 PELI2Q9HAT8 420 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 MCCC2Q9HCC0 563 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 SLC22A14Q9Y267 594 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 EML6Q6ZMW3 1958 aa12.46□□□□□ -0.41
HMGB1P24-201ENST00000611897 HCFC1P51610 2035 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 A8MVJ9 347 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 CDC7O00311 574 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 DNALI1O14645 258 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 DIAPH2O60879 1101 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 WDR47O94967 919 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 ENO2P09104 434 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 TFEBP19484 476 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 TRHRP34981 398 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 NR0B1P51843 470 aaKnown RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 CCZ1BP86790 482 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 CCZ1P86791 482 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 SLBPQ14493 270 aaKnown RBP eCLIP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 CMPK2Q5EBM0 449 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 TEDDM1Q5T9Z0 273 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 TRMT10BQ6PF06 316 aaKnown RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 NXPE4Q6UWF7 544 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 KIAA0408Q6ZU52 694 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 STRA8Q7Z7C7 330 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 IGDCC3Q8IVU1 814 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 APCDD1LQ8NCL9 501 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 OR52N2Q8NGI0 321 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 OR5M3Q8NGP4 307 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 VMP1Q96GC9 406 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 PWWP2AQ96N64 755 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 UCK2Q9BZX2 261 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 TIMMDC1Q9NPL8 285 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 PRTFDC1Q9NRG1 225 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 JRKLQ9Y4A0 524 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 KCNE2Q9Y6J6 123 aa12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 PHF3Q92576 2039 aaKnown RBP12.45□□□□□ -0.42
HMGB1P24-201ENST00000611897 A0A0G2JMM0 328 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 A0A1W2PPB8 328 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 A0A1W2PRS3 328 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 NCF1BA6NI72 391 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 NCF1CA8MVU1 366 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 KIR3DP1A8MWS1 328 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 NPIPA2E9PIF3 369 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 NPIPA3F8WFD2 350 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 TUBB4AP04350 444 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 IFNA16P05015 189 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 SERPINA6P08185 405 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 NCF1P14598 390 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 CAPN3P20807 821 aa12.44□□□□□ -0.42
HMGB1P24-201ENST00000611897 ELK3P41970 407 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms