RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 LILRB1Q8NHL6 650 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MOSPD2Q8NHP6 518 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CCL4L1Q8NHW4 92 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 GSDMBQ8TAX9 411 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 KIAA1524Q8TCG1 905 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 NR4A3Q92570 626 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 AGAP3Q96P47 875 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 NR1H4Q96RI1 486 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 DNAI2Q9GZS0 605 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MBNL1Q9NR56 388 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 DECR2Q9NUI1 292 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 DDX19AQ9NUU7 478 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 ADPRHL2Q9NX46 363 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 TAB2Q9NYJ8 693 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MRPL15Q9P015 296 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SLC25A10Q9UBX3 287 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SLC25A13Q9UJS0 675 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 STOML2Q9UJZ1 356 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 BAG5Q9UL15 447 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 BLOC1S6Q9UL45 172 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CORO1CQ9ULV4 474 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 ICKQ9UPZ9 632 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 FARSAQ9Y285 508 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 FADS3Q9Y5Q0 445 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MYH11P35749 1972 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 A0A1W2PQ09 198 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TYW5A2RUC4 315 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 GAGE10A6NGK3 116 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 MYO1GB0I1T2 1018 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 HHLA1C9JL84 531 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 H0YCG3 227 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ARHGEF9O43307 516 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ADAM20O43506 726 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 FMO6PO60774 539 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SLC19A2O60779 497 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SPAG6O75602 509 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SLC22A3O75751 556 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ADRB3P13945 408 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CD19P15391 556 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SAT1P21673 171 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ADORA2BP29275 332 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CD86P42081 329 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PTDSS1P48651 473 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 LMAN1P49257 510 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 NDST2P52849 883 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 RPL7AP62424 266 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TNNC1P63316 161 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 RBPJQ06330 500 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TRIM29Q14134 588 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 NFATC4Q14934 902 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ZNF750Q32MQ0 723 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TBRG1Q3YBR2 411 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 EFHC1Q5JVL4 640 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CBWD5Q5RIA9 395 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 FAM69BQ5VUD6 431 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ZNF324BQ6AW86 544 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 DENND1BQ6P3S1 775 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ZNF549Q6P9A3 640 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CCDC186Q7Z3E2 898 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 NLRP14Q86W24 1093 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 C17orf82Q86X59 251 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CDC20BQ86Y33 519 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 IZUMO1Q8IYV9 350 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ZNF619Q8N2I2 560 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 WDTC1Q8N5D0 677 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ZBTB2Q8N680 514 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SLC2A14Q8TDB8 520 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PPP4R1Q8TF05 950 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ABHD5Q8WTS1 349 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 NOC3LQ8WTT2 800 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PATE1Q8WXA2 126 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TAF4BQ92750 862 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 N4BP2L2Q92802 583 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PRICKLE1Q96MT3 831 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 GBP5Q96PP8 586 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 OR6C1Q96RD1 312 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PRR25Q96S07 402 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CITED2Q99967 270 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 FAM213AQ9BRX8 229 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TEX12Q9BXU0 123 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TRIM5Q9C035 493 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SLC25A32Q9H2D1 315 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CXorf36Q9H7Y0 433 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 COPS7BQ9H9Q2 264 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 LRTM1Q9HBL6 345 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 CSNK1G1Q9HCP0 422 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 PDE11AQ9HCR9 933 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 LIN7CQ9NUP9 197 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SPATS2LQ9NUQ6 558 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 TRMT1Q9NXH9 659 aaKnown RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 IL17CQ9P0M4 197 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 MARCH4Q9P2E8 410 aaPredicted RBP4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SEC14L3Q9UDX4 400 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 MOSPD1Q9UJG1 213 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SUFUQ9UMX1 484 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 SNX7Q9UNH6 387 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 HPSEQ9Y251 543 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 ITM2BQ9Y287 266 aa4.14□□□□□ -1.75
LINC00540-201ENST00000611481 MEMO1Q9Y316 297 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms