RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 F2RL3Q96RI0 385 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 LMF1Q96S06 567 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 MRPL57Q9BQC6 102 aaKnown RBP11.7□□□□□ -0.54
C19orf54-208ENST00000598352 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 MS4A8Q9BY19 250 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 CPSF2Q9P2I0 782 aaKnown RBP11.7□□□□□ -0.54
C19orf54-208ENST00000598352 XPR1Q9UBH6 696 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 CLDN16Q9Y5I7 305 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 TNPO3Q9Y5L0 923 aaKnown RBP11.7□□□□□ -0.54
C19orf54-208ENST00000598352 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 LRRK2Q5S007 2527 aa11.7□□□□□ -0.54
C19orf54-208ENST00000598352 USP9XQ93008 2570 aaPredicted RBP11.7□□□□□ -0.54
C19orf54-208ENST00000598352 STX16-NPEPL1H3BU86 382 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 CYR61O00622 381 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 OR7A17O14581 309 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 STX16O14662 325 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 B4GALT2O60909 372 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SEC24DO94855 1032 aaPredicted RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SHBGP04278 402 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 EEF1DP29692 281 aaKnown RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 PLA2G16P53816 162 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 GTF2H2Q13888 395 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 NSDHLQ15738 373 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SFT2D3Q587I9 215 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 MFSD4BQ5TF39 518 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 PLAG1Q6DJT9 500 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 GTF2H2CQ6P1K8 395 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 MED27Q6P2C8 311 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 ISLR2Q6UXK2 745 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 ZNF793Q6ZN11 406 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SH2D5Q6ZV89 423 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 RNF175Q8N4F7 328 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 L3MBTL4Q8NA19 623 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 BRIX1Q8TDN6 353 aaKnown RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 METTL21AQ8WXB1 218 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 CCT6BQ92526 530 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 UBE2E3Q969T4 207 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 PHF21BQ96EK2 531 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SCYL1Q96KG9 808 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 NSUN5Q96P11 429 aaKnown RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 NPLQ9BXD5 320 aaPredicted RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 REXO4Q9GZR2 422 aaKnown RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
C19orf54-208ENST00000598352 ZBTB26Q9HCK0 441 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 PCTPQ9UKL6 214 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 PLAAQ9Y263 795 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 B3GNT3Q9Y2A9 372 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 TSC22D4Q9Y3Q8 395 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 SCN2AQ99250 2005 aa11.69□□□□□ -0.54
C19orf54-208ENST00000598352 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 PRMT3O60678 531 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 UGDHO60701 494 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 SCELO95171 688 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 RPS17P08708 135 aaKnown RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 ICAM2P13598 275 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 MAOAP21397 527 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 JAK1P23458 1154 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 PIK3CBP42338 1070 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 HNRNPFP52597 415 aaKnown RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 MFAP5Q13361 173 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 HIST2H2ACQ16777 129 aaPredicted RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 TMEM35AQ53FP2 167 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 PRR30Q53SZ7 412 aaPredicted RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 DEPDC1Q5TB30 811 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 LGSNQ5TDP6 509 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 LIPJQ5W064 366 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 HIST2H2AA3Q6FI13 130 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 H3F3CQ6NXT2 135 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 CUZD1Q86UP6 607 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 ZADH2Q8N4Q0 377 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 TMEM52Q8NDY8 209 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 HUS1BQ8NHY5 278 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 PPP4R1Q8TF05 950 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 IPPKQ9H8X2 491 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 NECTIN3Q9NQS3 549 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 TMEM216Q9P0N5 145 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 PSMC3IPQ9P2W1 217 aaPredicted RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
C19orf54-208ENST00000598352 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 RNF11Q9Y3C5 154 aa11.68□□□□□ -0.54
C19orf54-208ENST00000598352 POLEQ07864 2286 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 TCRBV16S1A1N1A0A5B0 115 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 TTLL8A6PVC2 850 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 A8MT66 165 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 FOXO6A8MYZ6 492 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 H0YIV9 168 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 RTCAO00442 366 aaKnown RBP11.67□□□□□ -0.54
C19orf54-208ENST00000598352 B3GALT2O43825 422 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 TGFB1P01137 390 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 PCNAP12004 261 aa11.67□□□□□ -0.54
C19orf54-208ENST00000598352 ATP5A1P25705 553 aaKnown RBP11.67□□□□□ -0.54
C19orf54-208ENST00000598352 CERS1P27544 350 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms