RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZNF860A6NHJ4 632 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 NPHS1O60500 1241 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 RDH16O75452 317 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 KLF7O75840 302 aaPredicted RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 ENO1P06733 434 aaKnown RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 DRD4P21917 467 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 PTX3P26022 381 aaPredicted RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 PLA2G16P53816 162 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 UCNP55089 124 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 WDR4P57081 412 aaKnown RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 SKP1P63208 163 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 MAT1AQ00266 395 aaKnown RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 NKG7Q16617 165 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 SYT16Q17RD7 645 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 TMEM35AQ53FP2 167 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 SGO1Q5FBB7 561 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 HHATQ5VTY9 493 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 KHDRBS2Q5VWX1 349 aaKnown RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 TRIM40Q6P9F5 258 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 ABHD17CQ6PCB6 329 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 DYDC1Q8WWB3 177 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 STARD8Q92502 1023 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 KCNA7Q96RP8 456 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 YIPF2Q9BWQ6 316 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 SLC29A3Q9BZD2 475 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 SHCBP1LQ9BZQ2 653 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 FARSBQ9NSD9 589 aaKnown RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 ZNF282Q9UDV7 671 aaPredicted RBP18.29■□□□□ 0.52
PNKP-207ENST00000596014 PPT2Q9UMR5 302 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 PADI2Q9Y2J8 665 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 MGAQ8IWI9 3026 aa18.29■□□□□ 0.52
PNKP-207ENST00000596014 IGLV3-12A0A075B6K2 115 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 A0A0G2JN53 185 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 EBAG9O00559 213 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 CREG1O75629 220 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 PDYNP01213 254 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 FOXA1P55317 472 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 TMPRSS3P57727 454 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 FOXL2P58012 376 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 BTN3A2P78410 334 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 OCA2Q04671 838 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 TGM3Q08188 693 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 VWA2Q5GFL6 755 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 TCHHL1Q5QJ38 904 aaPredicted RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 FAM69BQ5VUD6 431 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 UBE3DQ7Z6J8 389 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 SRFBP1Q8NEF9 429 aaKnown RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 OR5T3Q8NGG3 340 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 OR51Q1Q8NH59 317 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 STT3BQ8TCJ2 826 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 SELENOMQ8WWX9 145 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 FAR2Q96K12 515 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 ZNF317Q96PQ6 595 aaPredicted RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 PAIP2Q9BPZ3 127 aaKnown RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 WDR54Q9H977 334 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 CPNE5Q9HCH3 593 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 PRDM7Q9NQW5 492 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 NKIRAS1Q9NYS0 192 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 TIMM22Q9Y584 194 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 VSTM2BA6NLU5 285 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 MANBAO00462 879 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 DNAJB6O75190 326 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 ETHE1O95571 254 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 KRT6AP02538 564 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 KRT6BP04259 564 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 HMOX2P30519 316 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 KRT6CP48668 564 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 CUL3Q13618 768 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 ARL13AQ5H913 290 aaPredicted RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 TMEM151BQ8IW70 566 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 SHISA5Q8N114 240 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 QRFPRQ96P65 431 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 KCNC2Q96PR1 638 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 TNFRSF12AQ9NP84 129 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 MKKSQ9NPJ1 570 aaPredicted RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 HCN3Q9P1Z3 774 aa18.28■□□□□ 0.52
PNKP-207ENST00000596014 PTRH2Q9Y3E5 179 aaKnown RBP18.28■□□□□ 0.52
PNKP-207ENST00000596014 ITPR1Q14643 2758 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 SAP18O00422 153 aaKnown RBP18.27■□□□□ 0.52
PNKP-207ENST00000596014 NKX2-8O15522 239 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 ULK1O75385 1050 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 CHRNGP07510 517 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 ARRB2P32121 409 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 SERPINB5P36952 375 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 OLR1P78380 273 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 GALNT1Q10472 559 aaPredicted RBP18.27■□□□□ 0.52
PNKP-207ENST00000596014 RCN2Q14257 317 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 CHI3L2Q15782 390 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 CUZD1Q86UP6 607 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 ZSCAN1Q8NBB4 408 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 OR2Y1Q8NGV0 311 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 PPP1R14CQ8TAE6 165 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 RGMAQ96B86 450 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 SPSB2Q99619 263 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 CENPKQ9BS16 269 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 TBCDQ9BTW9 1192 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 TGIF2Q9GZN2 237 aa18.27■□□□□ 0.52
PNKP-207ENST00000596014 NSRP1Q9H0G5 558 aaKnown RBP18.27■□□□□ 0.52
PNKP-207ENST00000596014 CLK4Q9HAZ1 481 aaKnown RBP18.27■□□□□ 0.52
PNKP-207ENST00000596014 NXT1Q9UKK6 140 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms