RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 VN1R4Q7Z5H5 301 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 OR5T3Q8NGG3 340 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 OR9A1PQ8NGU1 263 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 ZCCHC10Q8TBK6 192 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 INTS10Q9NVR2 710 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 ALKBH4Q9NXW9 302 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 CRYL1Q9Y2S2 319 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 MAD1L1Q9Y6D9 718 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 CUBNO60494 3623 aa12.81□□□□□ -0.36
SHKBP1-208ENST00000595726 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 H3BMM5 538 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 H7BY64 318 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 CCDC188H7C350 402 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 KPNA5O15131 536 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 BANF1O75531 89 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 ESR1P03372 595 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 F7P08709 466 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 ERGP11308 486 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 SLC1A2P43004 574 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 DR1Q01658 176 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 DHX9Q08211 1270 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 GBX1Q14549 363 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 PAOXQ6QHF9 649 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 C16orf47Q6ZP98 133 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 SYDE1Q6ZW31 735 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 PCGF5Q86SE9 256 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 DENND6AQ8IWF6 608 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 CYP4Z2PQ8N1L4 340 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 C17orf53Q8N3J3 647 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 KCT2Q8NC54 265 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 MCOLN3Q8TDD5 553 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 FAM136AQ96C01 138 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 PRAP1Q96NZ9 151 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 SMC6Q96SB8 1091 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 PKP4Q99569 1192 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
SHKBP1-208ENST00000595726 A0A0G2JMM0 328 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 A0A1W2PPB8 328 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 A0A1W2PRS3 328 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 FIGNL2A6NMB9 653 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 A8MUA0 341 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 KIR3DP1A8MWS1 328 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 G3V3Y1 287 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 CDK2AP1O14519 115 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 PGAM1P18669 254 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 TACR1P25103 407 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 PPP2R2BQ00005 443 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 PLGLB1Q02325 96 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 CTBP1Q13363 440 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 CRYMQ14894 314 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 TMEM214Q6NUQ4 689 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 LMNTD2Q8IXW0 634 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 TMEM156Q8N614 296 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 ARMC2Q8NEN0 867 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 NFAM1Q8NET5 270 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 MAGEC3Q8TD91 643 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 CREB3L4Q8TEY5 395 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 FBXO6Q9NRD1 293 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 C20orf96Q9NUD7 363 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 GALPQ9UBC7 116 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 RNF14Q9UBS8 474 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 NAALAD2Q9Y3Q0 740 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
SHKBP1-208ENST00000595726 E5RI56 91 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 FCHO1O14526 889 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 BCKDKO14874 412 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 B4GALT2O60909 372 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 MATN4O95460 622 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 B3GALT4O96024 378 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 CELA3AP09093 270 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 CHRM3P20309 590 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 ATP5DP30049 168 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 PNLIPRP1P54315 467 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 BTG2P78543 158 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 MPP1Q00013 466 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 RELAQ04206 551 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 HYAL2Q12891 473 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 POU4F3Q15319 338 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 OR2M7Q8NG81 312 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 LINC01560Q8TB33 94 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 CALML6Q8TD86 181 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
SHKBP1-208ENST00000595726 FAM167BQ9BTA0 163 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms