RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PLA2G16P53816 162 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 BTG2P78543 158 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 GTF2H2Q13888 395 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 ABRAXAS2Q15018 415 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 FAM219BQ5XKK7 198 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 SLC6A19Q695T7 634 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 NIPAL1Q6NVV3 410 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 JMJD6Q6NYC1 403 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 GTF2H2CQ6P1K8 395 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 METTL2BQ6P1Q9 378 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 IGFL2Q6UWQ7 119 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 ZNF793Q6ZN11 406 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 CPEB2Q7Z5Q1 589 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 TMEM52Q8NDY8 209 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 PLPP5Q8NEB5 264 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 OR7G3Q8NG95 312 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 OR52B6Q8NGF0 335 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 MTBPQ96DY7 904 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 PHF21BQ96EK2 531 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 VPS50Q96JG6 964 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 NSUN5Q96P11 429 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 REXO4Q9GZR2 422 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 LHPPQ9H008 270 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 MRPL46Q9H2W6 279 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 IPPKQ9H8X2 491 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 CLK4Q9HAZ1 481 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 ZBTB26Q9HCK0 441 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 PRDM7Q9NQW5 492 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 RIC8BQ9NVN3 520 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 TMEM216Q9P0N5 145 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 LUZP4Q9P127 313 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 TBK1Q9UHD2 729 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 PCTPQ9UKL6 214 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 G3BP2Q9UN86 482 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 CLDN16Q9Y5I7 305 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 CROCCQ5TZA2 2017 aa10.34□□□□□ -0.75
SHKBP1-206ENST00000595523 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 IGKV3D-11A0A0A0MRZ8 115 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 IQANK1A0A1B0GTG1 560 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 A0A1W2PPM1 405 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 ESPNB1AK53 854 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 STX16-NPEPL1H3BU86 382 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 GOLGA8RI6L899 631 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 STX16O14662 325 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 DPM1O60762 260 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 B4GALT2O60909 372 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 SH3BGRLO75368 114 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 SERPINA7P05543 415 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 ITGAMP11215 1152 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 PCNAP12004 261 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 RNH1P13489 461 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 MAOAP21397 527 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 MLLT10P55197 1068 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 SKP1P63208 163 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TRAF3Q13114 568 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 HIST2H2ACQ16777 129 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 PRR30Q53SZ7 412 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 LGSNQ5TDP6 509 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 AGAP7PQ5VUJ5 663 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 LIPJQ5W064 366 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 HIST2H2AA3Q6FI13 130 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TRIM40Q6P9F5 258 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 QSOX2Q6ZRP7 698 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 SH2D5Q6ZV89 423 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 RPS27LQ71UM5 84 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 HPS6Q86YV9 775 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 KBTBD2Q8IY47 623 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 CYP4X1Q8N118 509 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 L3MBTL4Q8NA19 623 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 HUS1BQ8NHY5 278 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 WDR20Q8TBZ3 569 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 BRIX1Q8TDN6 353 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 EPS8L3Q8TE67 593 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 UBLCP1Q8WVY7 318 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 METTL21AQ8WXB1 218 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 UBE2E3Q969T4 207 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 AGAP4Q96P64 663 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 CDK15Q96Q40 435 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 CSF3RQ99062 836 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TUBB6Q9BUF5 446 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 NOL11Q9H8H0 719 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 NECTIN3Q9NQS3 549 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 RNF11Q9Y3C5 154 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TSC22D4Q9Y3Q8 395 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 ANGPTL3Q9Y5C1 460 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 TNPO3Q9Y5L0 923 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 V9GYY5 206 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 EML6Q6ZMW3 1958 aa10.33□□□□□ -0.76
SHKBP1-206ENST00000595523 USP9YO00507 2555 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 POLEQ07864 2286 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 TCRBV16S1A1N1A0A5B0 115 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 H0YIV9 168 aa10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 SAP18O00422 153 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 RTCAO00442 366 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-206ENST00000595523 CYR61O00622 381 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms