RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SYCE1LA8MT33 242 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 NCF1CA8MVU1 366 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 H2AFYO75367 372 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 WISP2O76076 250 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 IL10P22301 178 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 GGT5P36269 586 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 SRSF11Q05519 484 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 TUBA3CQ13748 450 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ACAP2Q15057 778 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 OR4D1Q15615 310 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 MEP1AQ16819 746 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ZXDCQ2QGD7 858 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 KRTCAP3Q53RY4 240 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 UBAP2Q5T6F2 1119 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 MFSD4BQ5TF39 518 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 TUBA3EQ6PEY2 450 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ISCA2Q86U28 154 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 KLHDC8AQ8IYD2 350 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 SHISA5Q8N114 240 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 CAMKVQ8NCB2 501 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 OR4K1Q8NGD4 311 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 RHEBL1Q8TAI7 183 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 NXNL1Q96CM4 212 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 SCMH1Q96GD3 660 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 TSNARE1Q96NA8 513 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 VPS11Q9H270 941 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ALG9Q9H6U8 611 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 PELI2Q9HAT8 420 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 MMP25Q9NPA2 562 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 IGSF5Q9NSI5 407 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 NUDT4Q9NZJ9 180 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 HCN3Q9P1Z3 774 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ZNF835Q9Y2P0 537 aa16.5■□□□□ 0.23
SHKBP1-203ENST00000594298 ASPDHA6ND91 283 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SGK494L7N484 410 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 CDK2AP1O14519 115 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 KERAO60938 352 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 STK16O75716 305 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 WDR47O94967 919 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 KLHL2O95198 593 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 MLYCDO95822 493 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 STATHP02808 62 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 ALDOAP04075 364 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SNRPAP09012 282 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 IL1RNP18510 177 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 GNAZP19086 355 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 CD96P40200 585 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC6A12P48065 614 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 ADORA2A-AS1P86434 159 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC29A2Q14542 456 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 Q6ZPB1 254 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 CRLF3Q8IUI8 442 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 PDPRQ8NCN5 879 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 PLPP5Q8NEB5 264 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 KCTD4Q8WVF5 259 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 GPR137Q96N19 417 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SIGLEC12Q96PQ1 595 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 OR4K3Q96R72 315 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 AIF1LQ9BQI0 150 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 UTP23Q9BRU9 249 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SARGQ9BW04 601 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 KCNK13Q9HB14 408 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 ANKHQ9HCJ1 492 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 GPRC5BQ9NZH0 403 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 FETUBQ9UGM5 382 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SH3BGRL2Q9UJC5 107 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC22A7Q9Y694 548 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 SVILO95425 2214 aa16.49■□□□□ 0.23
SHKBP1-203ENST00000594298 TRBC2A0A5B9 178 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 COL6A2P12110 1019 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 COX6B1P14854 86 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 DLG1Q12959 904 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 OR1C1Q15619 314 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 C3AR1Q16581 482 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 FCRLBQ6BAA4 426 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 ADGRD1Q6QNK2 874 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 NXPE4Q6UWF7 544 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 ASPGQ86U10 573 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 PDSS2Q86YH6 399 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 LGI4Q8N135 537 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC5A8Q8N695 610 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 KCT2Q8NC54 265 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 SLC13A3Q8WWT9 602 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 NEIL2Q969S2 332 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 ISL2Q96A47 359 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 MAGED4Q96JG8 741 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 OR1F2PQ96R84 312 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 NPAS2Q99743 824 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 MACROD1Q9BQ69 325 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 DNAJC11Q9NVH1 559 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 PTBP2Q9UKA9 531 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 SH2B3Q9UQQ2 575 aa16.48■□□□□ 0.23
SHKBP1-203ENST00000594298 FBN2P35556 2912 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms