RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 GPR19Q15760 415 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 CPSF6Q16630 551 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 GSTA3Q16772 222 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 DEFB110Q30KQ9 67 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ATP6AP1LQ52LC2 224 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 CATSPEREQ5SY80 951 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 DCAF12Q5T6F0 453 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TMEM164Q5U3C3 297 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 FRG2Q64ET8 278 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 NXPE4Q6UWF7 544 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TMPRSS11BQ86T26 416 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 BPHLQ86WA6 291 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 MYLK4Q86YV6 388 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 MCATQ8IVS2 390 aaKnown RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TBC1D19Q8N5T2 526 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 SELENOMQ8WWX9 145 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 METTL2AQ96IZ6 378 aaKnown RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 C3orf30Q96M34 536 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 FRG2BQ96QU4 278 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TAAR9Q96RI9 348 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ZFYVE21Q9BQ24 234 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ASPSCR1Q9BZE9 553 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF385DQ9H6B1 395 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ACTR5Q9H9F9 607 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 FGF21Q9NSA1 209 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 SERTAD3Q9UJW9 196 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 RARRES3Q9UL19 164 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF490Q9ULM2 529 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TSC22D4Q9Y3Q8 395 aa11.33□□□□□ -0.6
DDX39A-219ENST00000592927 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
DDX39A-219ENST00000592927 A0A0J9YVX5 310 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 TMEM150CB9EJG8 249 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 HAT1O14929 419 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 NRP2O60462 931 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PRAMEF4O60810 478 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CTSVO60911 334 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CALB2P22676 271 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PRPH2P23942 346 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 HTR6P50406 440 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 RASSF2P50749 326 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 STX1BP61266 288 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 ERVK-8P63133 956 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 EMX2Q04743 252 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 DMTNQ08495 405 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 SQLEQ14534 574 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 IMPG1Q17R60 797 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PRAMEF9Q5VWM5 478 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 FBXO42Q6P3S6 717 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CEACAM20Q6UY09 585 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 Q6ZSR9 355 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 RNF44Q7L0R7 432 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PPP1R3BQ86XI6 285 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 LAS2Q8IYD9 372 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 GPR135Q8IZ08 494 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 KRT78Q8N1N4 520 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 OR4K1Q8NGD4 311 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 OR8K5Q8NH50 307 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CMTM5Q96DZ9 223 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 NSL1Q96IY1 281 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CTRCQ99895 268 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 ZPBPQ9BS86 351 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 DDA1Q9BW61 102 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 NT5DC2Q9H857 520 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 BRF2Q9HAW0 419 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 ADGRE2Q9UHX3 823 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PILRAQ9UKJ1 303 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 PPT2Q9UMR5 302 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 SLC12A4Q9UP95 1085 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 HEATR5BQ9P2D3 2071 aa11.32□□□□□ -0.6
DDX39A-219ENST00000592927 ATP6AP2A0A1C7CYW4 349 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 TRBC2A0A5B9 178 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 FFAR3O14843 346 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 GPR42O15529 346 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 HCRTR1O43613 425 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 SRPX2O60687 465 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 ATP6AP2O75787 350 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 OR2B3O76000 313 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 RSL1D1O76021 490 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 UNC5CO95185 931 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 PDYNP01213 254 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 FGF5P12034 268 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 IDO1P14902 403 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 VARSP26640 1264 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 SERPINB1P30740 379 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 GABRA4P48169 554 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 MNAT1P51948 309 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 ITGA1P56199 1179 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 RPS15AP62244 130 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 PHEXP78562 749 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 MEF2AQ02078 507 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms