RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 TMEM211Q6ICI0 200 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 ARHGAP11AQ6P4F7 1023 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 C16orf47Q6ZP98 133 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-238ENST00000592412 KIAA0408Q6ZU52 694 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 ABHD13Q7L211 337 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 CA13Q8N1Q1 262 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 SPC24Q8NBT2 197 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 B3GNT7Q8NFL0 401 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 RND1Q92730 232 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 FAM167BQ9BTA0 163 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 TMUB1Q9BVT8 246 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 RHBGQ9H310 441 aa17.03■□□□□ 0.32
CIRBP-238ENST00000592412 PPIEQ9UNP9 301 aaKnown RBP17.03■□□□□ 0.32
CIRBP-238ENST00000592412 PRRC2AP48634 2157 aaKnown RBP17.02■□□□□ 0.32
CIRBP-238ENST00000592412 FOXO6A8MYZ6 492 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 MYO1DO94832 1006 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 RNH1P13489 461 aaKnown RBP17.02■□□□□ 0.32
CIRBP-238ENST00000592412 PPP2R1BP30154 601 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 AHRP35869 848 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 CLCN2P51788 898 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 SKP1P63208 163 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 PMPCAQ10713 525 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 NIPAL1Q6NVV3 410 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 SCUBE1Q8IWY4 988 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 PALM2Q8IXS6 379 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 NAT8LQ8N9F0 302 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
CIRBP-238ENST00000592412 SLC5A11Q8WWX8 675 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 FBXL8Q96CD0 374 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 PDLIM2Q96JY6 352 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 TSNARE1Q96NA8 513 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 DEFB127Q9H1M4 99 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 CLK4Q9HAZ1 481 aaKnown RBP17.02■□□□□ 0.32
CIRBP-238ENST00000592412 KCNJ16Q9NPI9 418 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 ARL15Q9NXU5 204 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 TAS2R13Q9NYV9 303 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 SLC17A6Q9P2U8 582 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 MAD1L1Q9Y6D9 718 aa17.02■□□□□ 0.32
CIRBP-238ENST00000592412 A0A0G2JMM0 328 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 A0A1W2PPB8 328 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 A0A1W2PRS3 328 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 KIR3DP1A8MWS1 328 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 HNRNPFP52597 415 aaKnown RBP17.01■□□□□ 0.31
CIRBP-238ENST00000592412 CRYMQ14894 314 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 TERF2Q15554 542 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 TMEM200AQ86VY9 491 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 TMEM156Q8N614 296 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 TMEM52Q8NDY8 209 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 CREB3L4Q8TEY5 395 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 NCLNQ969V3 563 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 ZDHHC11Q9H8X9 412 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 LIN28AQ9H9Z2 209 aaKnown RBP17.01■□□□□ 0.31
CIRBP-238ENST00000592412 PNPLA3Q9NST1 481 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 KCMF1Q9P0J7 381 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 KCNN3Q9UGI6 736 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 FBXW2Q9UKT8 454 aa17.01■□□□□ 0.31
CIRBP-238ENST00000592412 AHSGP02765 367 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 HIST1H2AGP0C0S8 130 aaPredicted RBP17■□□□□ 0.31
CIRBP-238ENST00000592412 HOXB4P17483 251 aaPredicted RBP17■□□□□ 0.31
CIRBP-238ENST00000592412 HIST1H2ADP20671 130 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 IST1P53990 364 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 AP1S2P56377 157 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 CSHL1Q14406 222 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 XKR6Q5GH73 641 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 PSD4Q8NDX1 1056 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 HIST1H2AHQ96KK5 128 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 HIST1H2AJQ99878 128 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 H2AFJQ9BTM1 129 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 CXXC4Q9H2H0 198 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 PLAC1Q9HBJ0 212 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 LZTFL1Q9NQ48 299 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 MMACHCQ9Y4U1 282 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 LIPGQ9Y5X9 500 aa17■□□□□ 0.31
CIRBP-238ENST00000592412 USP27XA6NNY8 438 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 FAM166BA8MTA8 275 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 NPIPA2E9PIF3 369 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 NPIPA3F8WFD2 350 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 PSMD12O00232 456 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-238ENST00000592412 KLK8O60259 260 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 BANF1O75531 89 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 GUCA1CO95843 209 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 TUBB4AP04350 444 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 CDC25BP30305 580 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 SSR4P51571 173 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 DLX5P56178 289 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 RUNX2Q13950 521 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 PPP1R3AQ16821 1122 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 GXYLT1Q4G148 440 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 SBSNQ6UWP8 590 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 CNTN4Q8IWV2 1026 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 OR2M7Q8NG81 312 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 VMP1Q96GC9 406 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 PELI2Q9HAT8 420 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 TIMMDC1Q9NPL8 285 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 PNO1Q9NRX1 252 aaKnown RBP16.99■□□□□ 0.31
CIRBP-238ENST00000592412 FAM215AQ9Y5M1 114 aa16.99■□□□□ 0.31
CIRBP-238ENST00000592412 OR2J2O76002 312 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms