RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ARL4CP56559 192 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 TAS2R39P59534 338 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 STXBP1P61764 594 aaKnown RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 MGAT5Q09328 741 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 FRG1Q14331 258 aaKnown RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 C18orf21Q32NC0 220 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 ARMC10Q8N2F6 343 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 APCDD1LQ8NCL9 501 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 ANKRD49Q8WVL7 239 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 PDLIM2Q96JY6 352 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 FAR2Q96K12 515 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 LURAP1Q96LR2 239 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 TRIM8Q9BZR9 551 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 KLF13Q9Y2Y9 288 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-215ENST00000590696 MMACHCQ9Y4U1 282 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 ASB1Q9Y576 335 aa20.33■□□□□ 0.85
DDX39A-215ENST00000590696 OTOGQ6ZRI0 2925 aa20.33■□□□□ 0.84
DDX39A-215ENST00000590696 A0A0G2JN53 185 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 TRBV11-1A0A0K0K1C0 115 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 PRRG2O14669 202 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 MYO1DO94832 1006 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 WDR47O94967 919 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 GNAZP19086 355 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 POU3F2P20265 443 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-215ENST00000590696 GDF5P43026 501 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 MEOX1P50221 254 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 CLCN2P51788 898 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 DR1Q01658 176 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 RUNX2Q13950 521 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 TSNQ15631 228 aaKnown RBP20.32■□□□□ 0.84
DDX39A-215ENST00000590696 C3P1Q6ZMU1 363 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 FRA10AC1Q70Z53 315 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 FGD2Q7Z6J4 655 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 SULF2Q8IWU5 870 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX39A-215ENST00000590696 POGLUT1Q8NBL1 392 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 B3GNT7Q8NFL0 401 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 GAL3ST3Q96A11 431 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 CAPZA3Q96KX2 299 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 PNO1Q9NRX1 252 aaKnown RBP20.32■□□□□ 0.84
DDX39A-215ENST00000590696 CTNNAL1Q9UBT7 734 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 FBXW2Q9UKT8 454 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 PCNX1Q96RV3 2341 aa20.32■□□□□ 0.84
DDX39A-215ENST00000590696 E9PLN8 166 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 HNRNPH1P31943 449 aaKnown RBP20.31■□□□□ 0.84
DDX39A-215ENST00000590696 PTGER1P34995 402 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 KIR3DL1P43629 444 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 TMIGD1Q6UXZ0 262 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 SLCO4C1Q6ZQN7 724 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 CEP97Q8IW35 865 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 ZNF295-AS1Q8N0V1 137 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 FBXO36Q8NEA4 188 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 CCT6BQ92526 530 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 RHBDF1Q96CC6 855 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 VKORC1Q9BQB6 163 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 MOCS1Q9NZB8 636 aa20.31■□□□□ 0.84
DDX39A-215ENST00000590696 CSMD2Q7Z408 3487 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 GTF3C1Q12789 2109 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 KLRC4-KLRK1H3BQV0 150 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 ADAM10O14672 748 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 TFECO14948 347 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 ERI3O43414 337 aaKnown RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 RFC3P40938 356 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 SLC6A12P48065 614 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 PDIA2Q13087 525 aaKnown RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 SLBPQ14493 270 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 FASTKD3Q14CZ7 662 aaKnown RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 TERF2Q15554 542 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 ADAMTSL2Q86TH1 951 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 SCUBE1Q8IWY4 988 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 KLHDC8AQ8IYD2 350 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 TMEM156Q8N614 296 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 TTLQ8NG68 377 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 PHF10Q8WUB8 498 aaKnown RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 MS4A6EQ96DS6 147 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 VPS39Q96JC1 886 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 RUNDC3BQ96NL0 473 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 DMRTA2Q96SC8 542 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 NPLQ9BXD5 320 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 TRIM31Q9BZY9 425 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 PRTFDC1Q9NRG1 225 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 ZNF223Q9UK11 482 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-215ENST00000590696 DCHS2Q6V1P9 2916 aa20.3■□□□□ 0.84
DDX39A-215ENST00000590696 LRIT2A6NDA9 550 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 NCF1BA6NI72 391 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-215ENST00000590696 NCF1CA8MVU1 366 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-215ENST00000590696 TGFBR3LH3BV60 316 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 PEX1O43933 1283 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 ITGA10O75578 1167 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 SEC31AO94979 1220 aaKnown RBP20.29■□□□□ 0.84
DDX39A-215ENST00000590696 NCF1P14598 390 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-215ENST00000590696 PPP2R1BP30154 601 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 HSD17B7P56937 341 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 RAB38P57729 211 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 SLC13A2Q13183 592 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 EID3Q8N140 333 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 CYP4Z2PQ8N1L4 340 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 KRT78Q8N1N4 520 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 TMEM52Q8NDY8 209 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 NCLNQ969V3 563 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms