RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 BRIX1Q8TDN6 353 aaKnown RBP17.14■□□□□ 0.33
DDX39A-212ENST00000590260 MIB2Q96AX9 1013 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 PHF21BQ96EK2 531 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 REXO4Q9GZR2 422 aaKnown RBP17.14■□□□□ 0.33
DDX39A-212ENST00000590260 NECTIN3Q9NQS3 549 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 PCTPQ9UKL6 214 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 RNF11Q9Y3C5 154 aa17.14■□□□□ 0.33
DDX39A-212ENST00000590260 SPTA1P02549 2419 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 RELNP78509 3460 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 URADA6NGE7 173 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 A8MT66 165 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 RTCAO00442 366 aaKnown RBP17.13■□□□□ 0.33
DDX39A-212ENST00000590260 PPP6CO00743 305 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 PCDH17O14917 1159 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 B4GALT2O60909 372 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 SH3BGRLO75368 114 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 ZIC2O95409 532 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-212ENST00000590260 SERPINA7P05543 415 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 MAOAP21397 527 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 IL10P22301 178 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 VSNL1P62760 191 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 ABRAXAS2Q15018 415 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 TSNAXIP1Q2TAA8 658 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 PAGE2BQ5JRK9 111 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 B3GNTL1Q67FW5 361 aaPredicted RBP17.13■□□□□ 0.33
DDX39A-212ENST00000590260 MED27Q6P2C8 311 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 Q6ZS92 163 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 CUZD1Q86UP6 607 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 HPS6Q86YV9 775 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 KBTBD2Q8IY47 623 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 CYP4X1Q8N118 509 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 L3MBTL4Q8NA19 623 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 PNPLA2Q96AD5 504 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 CSF3RQ99062 836 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 NPAS2Q99743 824 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 TUBB6Q9BUF5 446 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 SORBS1Q9BX66 1292 aaKnown RBP17.13■□□□□ 0.33
DDX39A-212ENST00000590260 IPPKQ9H8X2 491 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 CLK4Q9HAZ1 481 aaKnown RBP17.13■□□□□ 0.33
DDX39A-212ENST00000590260 RIC8BQ9NVN3 520 aa17.13■□□□□ 0.33
DDX39A-212ENST00000590260 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 GOLGA8RI6L899 631 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 STX16O14662 325 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 WISP1O95388 367 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 ETHE1O95571 254 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 TGFB1P01137 390 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 RPS17P08708 135 aaKnown RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 RNH1P13489 461 aaKnown RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 TRAF3Q13114 568 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 NSDHLQ15738 373 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 AGAP7PQ5VUJ5 663 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 NIPAL1Q6NVV3 410 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 QSOX2Q6ZRP7 698 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 SCUBE1Q8IWY4 988 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 SIRT6Q8N6T7 355 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 HUS1BQ8NHY5 278 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 WDR20Q8TBZ3 569 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 METTL21AQ8WXB1 218 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 VPS50Q96JG6 964 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 AGAP4Q96P64 663 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 MRPL57Q9BQC6 102 aaKnown RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 ZNF717Q9BY31 904 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 KCMF1Q9P0J7 381 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 PSMC3IPQ9P2W1 217 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-212ENST00000590260 TBK1Q9UHD2 729 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 EMCNQ9ULC0 261 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
DDX39A-212ENST00000590260 TCRBV16S1A1N1A0A5B0 115 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 CYR61O00622 381 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 ALPPP05187 535 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 PCNAP12004 261 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 LIM2P55344 173 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 MFAP5Q13361 173 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 HIST2H2ACQ16777 129 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 LIPJQ5W064 366 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 PLAG1Q6DJT9 500 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 HIST2H2AA3Q6FI13 130 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 METTL2BQ6P1Q9 378 aaKnown RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 PAPD4Q6PIY7 484 aaKnown RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 LINC00696Q6ZRV3 163 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 ZNF483Q8TF39 744 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 PTCHD1Q96NR3 888 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 SERINC2Q96SA4 455 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 NPLQ9BXD5 320 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 OR51B5Q9H339 312 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 DMRT3Q9NQL9 472 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 ZNF225Q9UK10 706 aa17.11■□□□□ 0.33
DDX39A-212ENST00000590260 G3BP2Q9UN86 482 aaKnown RBP17.11■□□□□ 0.33
DDX39A-212ENST00000590260 NTNG1Q9Y2I2 539 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms