RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NDUFS4O43181 175 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 NOBOXO60393 691 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ZNF217O75362 1048 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 H6PDO95479 791 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CLPTM1O96005 669 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ALBP02768 609 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 IL3P08700 152 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 IGFBP4P22692 258 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ACSL1P33121 698 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 FRKP42685 505 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 PRIM2P49643 509 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 BLKP51451 505 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ARSFP54793 590 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SRP54P61011 504 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 STXBP1P61764 594 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 RPS15AP62244 130 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 MEF2AQ02078 507 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 ILF3Q12906 894 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS25-203ENST00000589520 TDGQ13569 410 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SLC9A5Q14940 896 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SF1Q15637 639 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 ADPRMQ3LIE5 342 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ZC3H12BQ5HYM0 836 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 GCNT6Q5T4J0 391 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 KIAA0895LQ68EN5 471 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ADNP2Q6IQ32 1131 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ZNF852Q6ZMS4 543 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CCDC80Q76M96 950 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SYT13Q7L8C5 426 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ADCK2Q7Z695 626 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ABI3BPQ7Z7G0 1075 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 FAM124AQ86V42 546 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 PTOV1Q86YD1 416 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 EPHX4Q8IUS5 362 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ZC3H7AQ8IWR0 971 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 RBM12BQ8IXT5 1001 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 C2orf73Q8N5S3 287 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 TMEM145Q8NBT3 493 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 OR2L3Q8NG85 312 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 MAGEE2Q8TD90 523 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 CREB3L4Q8TEY5 395 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 LCN9Q8WX39 176 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 OR1E3Q8WZA6 343 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ZBED6CLQ96FA7 236 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 KCNC2Q96PR1 638 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SLC35A5Q9BS91 424 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 GSDMCQ9BYG8 508 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SLC6A16Q9GZN6 736 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 SLC6A17Q9H1V8 727 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CHST8Q9H2A9 424 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CXorf56Q9H5V9 222 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CLK4Q9HAZ1 481 aaKnown RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 PRDM9Q9NQV7 894 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 CUEDC1Q9NWM3 386 aaPredicted RBP9.92□□□□□ -0.82
VPS25-203ENST00000589520 C3orf18Q9UK00 162 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ENTPD2Q9Y5L3 495 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 ORC6Q9Y5N6 252 aa9.92□□□□□ -0.82
VPS25-203ENST00000589520 KIR2DS5A0A0G2JLQ3 304 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 A0A0G2JNG1 304 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 KIR2DS3K7RE56 304 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 UPK1AO00322 258 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 SAP18O00422 153 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 EI24O14681 340 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 YY2O15391 372 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 PDPK1O15530 556 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 SUV39H1O43463 412 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 SH3BGRLO75368 114 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 KLHL18O94889 574 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 C6orf47O95873 294 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 TBX6O95947 436 aaPredicted RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 FABP3P05413 133 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 PABPC4LP0CB38 370 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 F3P13726 295 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ITGA2P17301 1181 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 DNAJA1P31689 397 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 SOX11P35716 441 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 CHI3L1P36222 383 aaPredicted RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 ACTR1BP42025 376 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ANXA11P50995 505 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 RAD23AP54725 363 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 NR1H2P55055 460 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ACTR1AP61163 376 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 HBA1P69905 142 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 RGS1Q08116 209 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 IL18R1Q13478 541 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 KIR2DS5Q14953 304 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 KCTD21Q4G0X4 260 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 LIN52Q52LA3 116 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 CRB2Q5IJ48 1285 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 MANEAQ5SRI9 462 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ZNF425Q6IV72 752 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 DUS1LQ6P1R4 473 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 SHQ1Q6PI26 577 aaKnown RBP9.91□□□□□ -0.82
VPS25-203ENST00000589520 BHLHB9Q6PI77 547 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ENPP6Q6UWR7 440 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 STK32CQ86UX6 486 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 ZDHHC21Q8IVQ6 265 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 CLEC4FQ8N1N0 589 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 AVL9Q8NBF6 648 aa9.91□□□□□ -0.82
VPS25-203ENST00000589520 OR2L5Q8NG80 312 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms