RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 ZNF655Q8N720 491 aaPredicted RBP23.54■■□□□ 1.36
RFX1-205ENST00000589239 BRINP2Q9C0B6 783 aa23.54■■□□□ 1.36
RFX1-205ENST00000589239 ASIC5Q9NY37 505 aa23.54■■□□□ 1.36
RFX1-205ENST00000589239 RAPGEFL1Q9UHV5 662 aa23.54■■□□□ 1.36
RFX1-205ENST00000589239 EEDO75530 441 aaKnown RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 MYO1DO94832 1006 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 ZNF888P0CJ79 500 aaPredicted RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 TRIM40Q6P9F5 258 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 MIER2Q8N344 545 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 AMER3Q8N944 861 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 TEX37Q96LM6 180 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 TSSK3Q96PN8 268 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 TEFMQ96QE5 360 aaKnown RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 GVINP1Q7Z2Y8 2422 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 GNG14A0A1W2PPG7 69 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 ZSCAN9O15535 394 aaPredicted RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 ANXA4P09525 319 aaPredicted RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 GPX3P22352 226 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 MAPK1P28482 360 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 KLF10Q13118 480 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 TMTC4Q5T4D3 741 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 OR4C11Q6IEV9 310 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 UTP15Q8TED0 518 aaKnown RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 EGLN2Q96KS0 407 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 KCNC2Q96PR1 638 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 ACTL8Q9H568 366 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 IRAK4Q9NWZ3 460 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 SIRT5Q9NXA8 310 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 MRPS2Q9Y399 296 aaKnown RBP23.53■■□□□ 1.36
RFX1-205ENST00000589239 WDFY3Q8IZQ1 3526 aa23.53■■□□□ 1.36
RFX1-205ENST00000589239 T-ENOLP0DO92 83 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 ACPPP15309 386 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 TPP2P29144 1249 aaPredicted RBP23.52■■□□□ 1.36
RFX1-205ENST00000589239 ATP4BP51164 291 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 PDX1P52945 283 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 UFM1P61960 85 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 MUM1Q2TAK8 710 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 TMEM214Q6NUQ4 689 aaKnown RBP23.52■■□□□ 1.36
RFX1-205ENST00000589239 ZNF793Q6ZN11 406 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 GAL3ST3Q96A11 431 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 ZNF285Q96NJ3 590 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 PRDM7Q9NQW5 492 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.52■■□□□ 1.36
RFX1-205ENST00000589239 TOR4AQ9NXH8 423 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 CCDC167Q9P0B6 97 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 STOML1Q9UBI4 398 aa23.52■■□□□ 1.36
RFX1-205ENST00000589239 SPTBP11277 2137 aa23.52■■□□□ 1.35
RFX1-205ENST00000589239 CAPN14A8MX76 684 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 TMEM150CB9EJG8 249 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 C9JVG2 144 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 PSMD12O00232 456 aaPredicted RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 HNRNPCL1O60812 293 aaKnown RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 RFPL3O75679 317 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 KLHL18O94889 574 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 SSR2P43308 183 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 TRIP6Q15654 476 aaKnown RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 MANEAQ5SRI9 462 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 NUDT13Q86X67 352 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 DEFB124Q8NES8 71 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 NUDT8Q8WV74 236 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 NLNQ9BYT8 704 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 SPRTNQ9H040 489 aaPredicted RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 ANKRD28O15084 1053 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 PRPS2P11908 318 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 PIK3R1P27986 724 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 ZFP36L1Q07352 338 aaKnown RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 PRTGQ2VWP7 1150 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 PDCD4Q53EL6 469 aaKnown RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 SRFBP1Q8NEF9 429 aaKnown RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 OR8K5Q8NH50 307 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 CDC26Q8NHZ8 85 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 DENND2DQ9H6A0 471 aaPredicted RBP23.51■■□□□ 1.35
RFX1-205ENST00000589239 LRCH1Q9Y2L9 728 aa23.51■■□□□ 1.35
RFX1-205ENST00000589239 URADA6NGE7 173 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 NVLO15381 856 aaKnown RBP23.5■■□□□ 1.35
RFX1-205ENST00000589239 VHLP40337 213 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 ILKQ13418 452 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 CCNYL2Q5T2Q4 361 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 PAGE2Q7Z2X7 111 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 PROKR1Q8TCW9 393 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 DDX31Q9H8H2 851 aaKnown RBP23.5■■□□□ 1.35
RFX1-205ENST00000589239 FAM186AA6NE01 2351 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 PCNX2A6NKB5 2137 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 SMIM10L1P0DMW3 83 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 HIST1H1TP22492 207 aaPredicted RBP23.5■■□□□ 1.35
RFX1-205ENST00000589239 PTPN4P29074 926 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 BTN3A2P78410 334 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 DEFB134Q4QY38 66 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 AGKQ53H12 422 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 OR52E8Q6IFG1 317 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 ABHD13Q7L211 337 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 ARHGEF39Q8N4T4 335 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 KRTCAP2Q8N6L1 136 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 OR1L3Q8NH93 324 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 GFM2Q969S9 779 aaKnown RBP23.5■■□□□ 1.35
RFX1-205ENST00000589239 SMIM10Q96HG1 83 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 TBCDQ9BTW9 1192 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 FGF21Q9NSA1 209 aa23.5■■□□□ 1.35
RFX1-205ENST00000589239 H3BMH7 237 aa23.49■■□□□ 1.35
RFX1-205ENST00000589239 SLC22A3O75751 556 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms