RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PEX11GQ96HA9 241 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 IP6K3Q96PC2 410 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 SMC6Q96SB8 1091 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 ZNF382Q96SR6 550 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 TRIM55Q9BYV6 548 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 OR51B5Q9H339 312 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 PRDM7Q9NQW5 492 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 LANCL2Q9NS86 450 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 SENP1Q9P0U3 644 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 OR2W5A6NFC9 320 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 MAGEB17A8MXT2 336 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 ATXN7O15265 892 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-207ENST00000588542 OR4F21O95013 312 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 IGHEP01854 428 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 FAM87AP0C7U9 286 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 NAGLUP54802 743 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 EMP2P54851 167 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 POLE2P56282 527 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 RPS13P62277 151 aaKnown RBP19.07■□□□□ 0.64
DDX39A-207ENST00000588542 CHAF1BQ13112 559 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 RUNX2Q13950 521 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 TMEM35AQ53FP2 167 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 KHDRBS2Q5VWX1 349 aaKnown RBP19.07■□□□□ 0.64
DDX39A-207ENST00000588542 KIRREL2Q6UWL6 708 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 EXOC3L1Q86VI1 746 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 CA13Q8N1Q1 262 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 TCP10LQ8TDR4 215 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 FAR2Q96K12 515 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 FAM111AQ96PZ2 611 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 RBCK1Q9BYM8 510 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 VN1R1Q9GZP7 353 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 IQCGQ9H095 443 aaKnown RBP19.07■□□□□ 0.64
DDX39A-207ENST00000588542 P4HTMQ9NXG6 502 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 PSD3Q9NYI0 1048 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 TRPS1Q9UHF7 1281 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 MKL2Q9ULH7 1088 aa19.07■□□□□ 0.64
DDX39A-207ENST00000588542 TNRC6AQ8NDV7 1962 aaKnown RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 AGPSO00116 658 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 FOXE1O00358 373 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 RTCAO00442 366 aaKnown RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 ETHE1O95571 254 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 HEXBP07686 556 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 IL10P22301 178 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 FRG2Q64ET8 278 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 ZNF793Q6ZN11 406 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 CHSY3Q70JA7 882 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 CROCCP2Q86T23 111 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 C10orf107Q8IVU9 208 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 CCNYL1Q8N7R7 359 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 MYRIPQ8NFW9 859 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 MTFMTQ96DP5 389 aaKnown RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 PGM2Q96G03 612 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 MAGEB10Q96LZ2 347 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 KCNC2Q96PR1 638 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 FRG2BQ96QU4 278 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 OR1F2PQ96R84 312 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 NPLQ9BXD5 320 aaPredicted RBP19.06■□□□□ 0.64
DDX39A-207ENST00000588542 ING2Q9H160 280 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 MID2Q9UJV3 735 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 PPT2Q9UMR5 302 aa19.06■□□□□ 0.64
DDX39A-207ENST00000588542 MASP2O00187 686 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 SAP18O00422 153 aaKnown RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 PEX12O00623 359 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 UBFD1O14562 309 aaKnown RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 DNAJB5O75953 348 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 MLYCDO95822 493 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 FHP07954 510 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 PTX3P26022 381 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 CERS1P27544 350 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 MTTPP55157 894 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 RHAGQ02094 409 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 LCP2Q13094 533 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 LY6DQ14210 128 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 LIPMQ5VYY2 423 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 FAAH2Q6GMR7 532 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 TMEM205Q6UW68 189 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 FRMD7Q6ZUT3 714 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 GPRIN3Q6ZVF9 776 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 MED25Q71SY5 747 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 TMEM102Q8N9M5 508 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 LSM14AQ8ND56 463 aaKnown RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 SRFBP1Q8NEF9 429 aaKnown RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 OR11G2Q8NGC1 345 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 TBC1D20Q96BZ9 403 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 C8orf44Q96CB5 159 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 SERINC2Q96SA4 455 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 ARHGAP9Q9BRR9 750 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 TBCDQ9BTW9 1192 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 CENPHQ9H3R5 247 aa19.05■□□□□ 0.64
DDX39A-207ENST00000588542 FARSBQ9NSD9 589 aaKnown RBP19.05■□□□□ 0.64
DDX39A-207ENST00000588542 TLN1Q9Y490 2541 aaKnown RBP19.04■□□□□ 0.64
DDX39A-207ENST00000588542 A0A088AWK7 358 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 A0A1W2PQ72 361 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 FAM227AF5H4B4 570 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 PLPP1O14494 284 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 B3GALT2O43825 422 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 ALOX12BO75342 701 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 SCELO95171 688 aa19.04■□□□□ 0.64
DDX39A-207ENST00000588542 RNH1P13489 461 aaKnown RBP19.04■□□□□ 0.64
DDX39A-207ENST00000588542 ZNF10P21506 573 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms