RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PHF12Q96QT6 1004 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 SLC6A16Q9GZN6 736 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 RPF2Q9H7B2 306 aaKnown RBP18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ANKMY1Q9P2S6 941 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 EML5Q05BV3 1969 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 A0A0A6YYD5 115 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 OR5K3A6NET4 321 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 GPR37L1O60883 481 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ZCCHC18P0CG32 403 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 GGT1P19440 569 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 FASLGP48023 281 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 TRA2BP62995 288 aaKnown RBP18.9■□□□□ 0.62
TRIM47-204ENST00000587339 SIGLEC14Q08ET2 396 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 CYP51A1Q16850 503 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 MPEG1Q2M385 716 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 FCRL6Q6DN72 434 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 ZNF793Q6ZN11 406 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 VN1R4Q7Z5H5 301 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 AMER3Q8N944 861 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 CIDECQ96AQ7 238 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-204ENST00000587339 NSMCE2Q96MF7 247 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 VPS4AQ9UN37 437 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 AURKCQ9UQB9 309 aa18.9■□□□□ 0.62
TRIM47-204ENST00000587339 CEP192Q8TEP8 1941 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 GSTA4O15217 222 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 CTSVO60911 334 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ABCB1P08183 1280 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-204ENST00000587339 SLC35G6P0C7Q6 338 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 TYRP1P17643 537 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ALDH9A1P49189 494 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 FNTBP49356 437 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 HBA1P69905 142 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 RGS1Q08116 209 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ABHD18Q0P651 414 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 SLC14A1Q13336 389 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 SLC9A5Q14940 896 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 LRRC36Q1X8D7 754 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ARMC6Q6NXE6 501 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ASPGQ86U10 573 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 CALHM3Q86XJ0 350 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 LILRA2Q8N149 483 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 C10orf111Q8N326 155 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 SDR16C5Q8N3Y7 309 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ARL14Q8N4G2 192 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 OR2A5Q96R48 311 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 KLHL25Q9H0H3 589 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 TPT1P8Q9HAU6 139 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 CCM2LQ9NUG4 571 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-204ENST00000587339 TEX10Q9NXF1 929 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF282Q9UDV7 671 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-204ENST00000587339 RIMS3Q9UJD0 308 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 KLK4Q9Y5K2 254 aa18.89■□□□□ 0.61
TRIM47-204ENST00000587339 A0A0J9YVX5 310 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 A0A0J9YY10 115 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 FAM220BPB1ANY3 271 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 C4orf51C9J302 202 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 LMO7DNF2Z398 122 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 CASQ2O14958 399 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 SDC3O75056 442 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 GPIP06744 558 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 DDX5P17844 614 aaKnown RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 HIST1H1TP22492 207 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 TSFMP43897 325 aaKnown RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 BIRC2Q13490 618 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 LPCAT4Q643R3 524 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 SERPINA11Q86U17 422 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 FAM47BQ8NA70 645 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 OR8K5Q8NH50 307 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 GOT1L1Q8NHS2 421 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-204ENST00000587339 FIG4Q92562 907 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 RSC1A1Q92681 617 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PKP2Q99959 881 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 VCX3BQ9H321 246 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PRDM7Q9NQW5 492 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 EVA1BQ9NVM1 165 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 ARMC1Q9NVT9 282 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 TCRBV5S2A0A599 114 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 C1orf226A1L170 272 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 C6orf47O95873 294 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 FAM58BPP0C7Q3 252 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PVRP15151 417 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 GPX2P18283 190 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PEX2P28328 305 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 LSSP48449 732 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 GZMMP51124 257 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 RAB8AP61006 207 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 RELAQ04206 551 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 TGM3Q08188 693 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 MAP7Q14244 749 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 PRSS53Q2L4Q9 553 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 DEFB133Q30KQ1 61 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 WLSQ5T9L3 541 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 KLHL35Q6PF15 583 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 ZNF438Q7Z4V0 828 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 TMEM126BQ8IUX1 230 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 MICU2Q8IYU8 434 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 ACOT4Q8N9L9 421 aa18.88■□□□□ 0.61
TRIM47-204ENST00000587339 KCT2Q8NC54 265 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms