RNA–Protein interactions for RNA: ENST00000587204.1

TUBB6-206, Transcript of tubulin beta 6 class V, humanhuman

TSL 2

Gene TUBB6, Length 408 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-206ENST00000587204 C3AR1Q16581 482 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 MAPKAPK3Q16644 382 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 SP5Q6BEB4 398 aaPredicted RBP13.28□□□□□ -0.28
TUBB6-206ENST00000587204 QSOX2Q6ZRP7 698 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 CLNKQ7Z7G1 428 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
TUBB6-206ENST00000587204 FAM47BQ8NA70 645 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 ELP5Q8TE02 316 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 ITLN2Q8WWU7 325 aaPredicted RBP13.28□□□□□ -0.28
TUBB6-206ENST00000587204 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
TUBB6-206ENST00000587204 SCMH1Q96GD3 660 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 FAR2Q96K12 515 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 TMEM79Q9BSE2 394 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 MCMBPQ9BTE3 642 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 PRDM9Q9NQV7 894 aa13.28□□□□□ -0.28
TUBB6-206ENST00000587204 PNO1Q9NRX1 252 aaKnown RBP13.28□□□□□ -0.28
TUBB6-206ENST00000587204 IGKV3D-11A0A0A0MRZ8 115 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TRBV11-1A0A0K0K1C0 115 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TCRBV16S1A1N1A0A5B0 115 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 CLGNO14967 610 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SLC19A2O60779 497 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 PRAMEF4O60810 478 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SH3BGRLO75368 114 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SLC25A12O75746 678 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 NEURL1O76050 574 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 MYO1DO94832 1006 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SP1P08047 785 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SNRPB2P08579 225 aaKnown RBP13.27□□□□□ -0.29
TUBB6-206ENST00000587204 CCDC166P0CW27 439 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 GNAZP19086 355 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 RFC3P40938 356 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 CA7P43166 264 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 HNMTP50135 292 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 HNRNPFP52597 415 aaKnown RBP13.27□□□□□ -0.29
TUBB6-206ENST00000587204 PLA2G16P53816 162 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 MLF1P58340 268 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.29
TUBB6-206ENST00000587204 POU4F1Q01851 419 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 CALCOCO2Q13137 446 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TGFBIQ15582 683 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 PRAMEF9Q5VWM5 478 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 SLC25A25Q6KCM7 469 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 NIPAL1Q6NVV3 410 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TMIGD1Q6UXZ0 262 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
TUBB6-206ENST00000587204 MRGPRGQ86SM5 289 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 GPSM1Q86YR5 675 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 CTAGE3PQ8IX95 158 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TMEM178AQ8NBL3 297 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TMEM52Q8NDY8 209 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 NFAM1Q8NET5 270 aaPredicted RBP13.27□□□□□ -0.29
TUBB6-206ENST00000587204 ANKRD7Q92527 254 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 MS4A6EQ96DS6 147 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 MAGED4Q96JG8 741 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 DNAJC11Q9NVH1 559 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 NSMCE4AQ9NXX6 385 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TXNDC16Q9P2K2 825 aa13.27□□□□□ -0.29
TUBB6-206ENST00000587204 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 TGFBR3LH3BV60 316 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 FAM155BO75949 473 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 WISP3O95389 354 aaPredicted RBP13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CD1DP15813 335 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CERS1P27544 350 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CASP6P55212 293 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
TUBB6-206ENST00000587204 XKR6Q5GH73 641 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 RNFT1Q5M7Z0 435 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 VN1R5Q7Z5H4 357 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 ABCA12Q86UK0 2595 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 KRT78Q8N1N4 520 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CPSF7Q8N684 471 aaKnown RBP13.26□□□□□ -0.29
TUBB6-206ENST00000587204 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 TSPAN17Q96FV3 270 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 GPR137Q96N19 417 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 FRMD6Q96NE9 622 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 POPDC3Q9HBV1 291 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 GRHL1Q9NZI5 618 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 CD274Q9NZQ7 290 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 FBXW2Q9UKT8 454 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 ENTPD4Q9Y227 616 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 ASB1Q9Y576 335 aa13.26□□□□□ -0.29
TUBB6-206ENST00000587204 GTF3C1Q12789 2109 aa13.25□□□□□ -0.29
TUBB6-206ENST00000587204 ASPDHA6ND91 283 aa13.25□□□□□ -0.29
TUBB6-206ENST00000587204 LRIT2A6NDA9 550 aa13.25□□□□□ -0.29
TUBB6-206ENST00000587204 HNRNPRO43390 633 aaKnown RBP13.25□□□□□ -0.29
TUBB6-206ENST00000587204 B3GALT2O43825 422 aa13.25□□□□□ -0.29
TUBB6-206ENST00000587204 NME2P1O60361 137 aa13.25□□□□□ -0.29
TUBB6-206ENST00000587204 CCNT2O60583 730 aaKnown RBP13.25□□□□□ -0.29
TUBB6-206ENST00000587204 TBX6O95947 436 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms