RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ZNF793Q6ZN11 406 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 LARP4Q71RC2 724 aaKnown RBP eCLIP16.09■□□□□ 0.172e-12■■■■□ 20.8
PRKCSH-203ENST00000586486 PRSS41Q7RTY9 318 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 PAGE2Q7Z2X7 111 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 ZCCHC7Q8N3Z6 543 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 C1orf52Q8N6N3 182 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 SLC38A9Q8NBW4 561 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 ACTRT2Q8TDY3 377 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 PPP1R36Q96LQ0 422 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 GBP5Q96PP8 586 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 SLC7A5P2Q9GIP4 190 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 AKTIPQ9H8T0 292 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 COPS7BQ9H9Q2 264 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 DHCR7Q9UBM7 475 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 CDC14AQ9UNH5 594 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 NAALAD2Q9Y3Q0 740 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 TMEM184BQ9Y519 407 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 CDRT15L2A8MXV6 281 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 RTCAO00442 366 aaKnown RBP16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 KIAA0754O94854 1291 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 DLGAP3O95886 979 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 ZNF28P17035 718 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 DRD4P21917 467 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 EPHA3P29320 983 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 AVPR1BP47901 424 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 IDH3AP50213 366 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 BTN3A2P78410 334 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 SLC9B1Q4ZJI4 515 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 C6orf136Q5SQH8 315 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 ZNF385CQ66K41 422 aaPredicted RBP16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 OGFOD2Q6N063 350 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 OR9A4Q8NGU2 314 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 RFWD2Q8NHY2 731 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 CLIP3Q96DZ5 547 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 SORBS1Q9BX66 1292 aaKnown RBP16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 NPLQ9BXD5 320 aaPredicted RBP16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 SPRY4Q9C004 299 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 EPN3Q9H201 632 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 WDR55Q9H6Y2 383 aaPredicted RBP16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 KCNK13Q9HB14 408 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 ASCL3Q9NQ33 180 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 KLHL14Q9P2G3 628 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 KLK13Q9UKR3 277 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 NEUROG3Q9Y4Z2 214 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 WDFY3Q8IZQ1 3526 aa16.08■□□□□ 0.17
PRKCSH-203ENST00000586486 A0A0A6YYC8 382 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 A0A0A6YYD5 115 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 A0A0G2JN53 185 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 I3L1I5 382 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 DIAPH2O60879 1101 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 PEX11AO75192 247 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 SEC22BO75396 215 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 STK17BO94768 372 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 ONECUT2O95948 504 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 NTRK1P04629 796 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 ITGAXP20702 1163 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 CERS1P27544 350 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 RBMS1P29558 406 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 TIA1P31483 386 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 RPL38P63173 70 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 GALNTL6Q49A17 601 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 RFTN2Q52LD8 501 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 ACAD11Q709F0 780 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 DTWD1Q8N5C7 304 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 ACOT4Q8N9L9 421 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 CCDC28BQ9BUN5 200 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 SCNM1Q9BWG6 230 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 FOXJ2Q9P0K8 574 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 MCM8Q9UJA3 840 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 DCTN4Q9UJW0 460 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 ACSL6Q9UKU0 697 aa16.08■□□□□ 0.16
PRKCSH-203ENST00000586486 SCN3AQ9NY46 2000 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 B3GALT2O43825 422 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 EEDO75530 441 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 B3GALT4O96024 378 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 LBPP18428 481 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 ALAS2P22557 587 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 CD82P27701 267 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 TPP2P29144 1249 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 ERVK-8P63133 956 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 RAE1P78406 368 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 ABHD18Q0P651 414 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 MAD2L1Q13257 205 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 DSG2Q14126 1118 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 MAP7Q14244 749 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 ZNF517Q6ZMY9 492 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 PARP9Q8IXQ6 854 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 AMER3Q8N944 861 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 CEP70Q8NHQ1 597 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 THOC1Q96FV9 657 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 OR52B2Q96RD2 323 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 EBF4Q9BQW3 602 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 TCF7L2Q9NQB0 619 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 ASIC5Q9NY37 505 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 GIMAP2Q9UG22 337 aa16.07■□□□□ 0.16
PRKCSH-203ENST00000586486 NDOR1Q9UHB4 597 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms