RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	AMER2	Q8N7J2	671 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	BRIX1	Q8TDN6	353 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	DCAKD	Q8WVC6	231 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	METTL21A	Q8WXB1	218 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	TSLP	Q969D9	159 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	GAL3ST3	Q96A11	431 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	MS4A6E	Q96DS6	147 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	PHF12	Q96QT6	1004 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	TUBB6	Q9BUF5	446 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	EFCAB11	Q9BUY7	163 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	CLK4	Q9HAZ1	481 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ASF1B	Q9NVP2	202 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ZNF180	Q9UJW8	692 aa		12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-223	ENST00000584760		A0A087WUV0	522 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	MAGEB17	A8MXT2	336 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760		K7EPI3	171 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ERI3	O43414	337 aa	Known RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	KLK8	O60259	260 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	WFS1	O76024	890 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	SEC24D	O94855	1032 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ABHD2	P08910	425 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	RHOXF2B	P0C7M4	288 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	POU3F2	P20265	443 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	JAK1	P23458	1154 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	CASP2	P42575	452 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	SERPINB9	P50453	376 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	IRF8	Q02556	426 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	PCDH1	Q08174	1060 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	CHIT1	Q13231	466 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	NAA30	Q147X3	362 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ABRAXAS2	Q15018	415 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	SETDB1	Q15047	1291 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ACAP2	Q15057	778 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	CRB2	Q5IJ48	1285 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ISLR2	Q6UXK2	745 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	TAOK1	Q7L7X3	1001 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	IFT20	Q8IY31	132 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	IQCK	Q8N0W5	287 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	PLPP5	Q8NEB5	264 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	RHOXF2	Q9BQY4	288 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	TXLNGY	Q9BZA5	131 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	VPS11	Q9H270	941 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	RHBG	Q9H310	441 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	EPS8L2	Q9H6S3	715 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	OPTC	Q9UBM4	332 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760	PCDHGA10	Q9Y5H3	936 aa		12.52	□□□□□ -0.41
SREBF1-223	ENST00000584760		A0A0G2JN53	185 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ANKUB1	A6NFN9	424 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ANKDD1B	A6NHY2	528 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	POC1B-GALNT4	F8VUJ3	575 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ITGAM	P11215	1152 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	RNH1	P13489	461 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ICAM2	P13598	275 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ELAVL4	P26378	380 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	CNTF	P26441	200 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ALDH18A1	P54886	795 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	AP2B1	P63010	937 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	LAPTM5	Q13571	262 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	ELOA	Q14241	798 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	NSDHL	Q15738	373 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	PAGE2B	Q5JRK9	111 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	PLAG1	Q6DJT9	500 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	KLC3	Q6P597	504 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	QSOX2	Q6ZRP7	698 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	LINC00696	Q6ZRV3	163 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	CA13	Q8N1Q1	262 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	SIRT6	Q8N6T7	355 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	OR2L5	Q8NG80	312 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	UHMK1	Q8TAS1	419 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	CCT6B	Q92526	530 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	QRFPR	Q96P65	431 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	LMF1	Q96S06	567 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	PTGFRN	Q9P2B2	879 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	IKBKG	Q9Y6K9	419 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	CELSR2	Q9HCU4	2923 aa		12.51	□□□□□ -0.41
SREBF1-223	ENST00000584760	IGKV3D-11	A0A0A0MRZ8	115 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	EXOC1L	A0A1B0GW35	172 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	LRRC14B	A6NHZ5	514 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	TRIM49D1	C9J1S8	452 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	RIPK2	O43353	540 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	B4GALT2	O60909	372 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	KRT38	O76015	456 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	FAM153B	P0C7A2	387 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	GFAP	P14136	432 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	EPB42	P16452	691 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	GCA	P28676	217 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	HPD	P32754	393 aa	Predicted RBP	12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	MSH2	P43246	934 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	BTN3A2	P78410	334 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	PFKFB4	Q16877	469 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	FAM153C	Q494X1	144 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	SFT2D3	Q587I9	215 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	GRHL2	Q6ISB3	625 aa		12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	PAPD4	Q6PIY7	484 aa	Known RBP	12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.5	□□□□□ -0.41
SREBF1-223	ENST00000584760	LAS2	Q8IYD9	372 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms