RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SNX25Q9H3E2 840 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 CFDP1Q9UEE9 299 aaPredicted RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 PILRAQ9UKJ1 303 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 MROH1Q8NDA8 1641 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 ALKQ9UM73 1620 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 NCOA2Q15596 1464 aa3.03□□□□□ -1.93
COPS3-217ENST00000583160 ARHGAP23Q9P227 1491 aa3.03□□□□□ -1.93
COPS3-217ENST00000583160 NKX6-3A6NJ46 265 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 TNFSF12O43508 249 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 RENP00797 406 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 THY1P04216 161 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 MTCP1P56278 107 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 CLDN17P56750 224 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 BTG1P62324 171 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 POU5F1Q01860 360 aaKnown RBP3.02□□□□□ -1.93
COPS3-217ENST00000583160 ACY1Q03154 408 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 LEMD1Q68G75 181 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 PRPF39Q86UA1 669 aaKnown RBP3.02□□□□□ -1.93
COPS3-217ENST00000583160 PRSS35Q8N3Z0 413 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 XXYLT1Q8NBI6 393 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 OR5M9Q8NGP3 310 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 RFT1Q96AA3 541 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 RBM41Q96IZ5 413 aaKnown RBP3.02□□□□□ -1.93
COPS3-217ENST00000583160 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 SERAC1Q96JX3 654 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 SPATA33Q96N06 139 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 ZNF558Q96NG5 402 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 POLR3GLQ9BT43 218 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 PAPOLGQ9BWT3 736 aaKnown RBP3.02□□□□□ -1.93
COPS3-217ENST00000583160 AUP1Q9Y679 476 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 KIF25-AS1Q9Y6Z4 181 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 COLEC10Q9Y6Z7 277 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 VWDEQ8N2E2 1590 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 SLIT1O75093 1534 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 SHANK2Q9UPX8 1470 aa3.02□□□□□ -1.93
COPS3-217ENST00000583160 MTUS2Q5JR59 1369 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 COL16A1Q07092 1604 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 SYNMO15061 1565 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 UGGT1Q9NYU2 1555 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 K7EQG2 157 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 TXNL1O43396 289 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 RECQL5O94762 991 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 EPORP19235 508 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 GSK3BP49841 420 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 PRR30Q53SZ7 412 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 SPANXN4Q5MJ08 99 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 CFAP58Q5T655 872 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 FAM166AQ6J272 317 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 FUT10Q6P4F1 479 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 DHRS11Q6UWP2 260 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 ENPP7Q6UWV6 458 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 TMUB2Q71RG4 321 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 BRINP3Q76B58 766 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 C5orf24Q7Z6I8 188 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 PRUNE1Q86TP1 453 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 RPAINQ86UA6 219 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 CARM1Q86X55 608 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 OR4Q3Q8NH05 313 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 LURAP1Q96LR2 239 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 GDAP1L1Q96MZ0 367 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 GTPBP2Q9BX10 602 aaKnown RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 STRADBQ9C0K7 418 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 FN3KQ9H479 309 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 PHPT1Q9NRX4 125 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 POLLQ9UGP5 575 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 SLC12A6Q9UHW9 1150 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 KLF2Q9Y5W3 355 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 ABCC3O15438 1527 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 PRDM15P57071 1507 aaPredicted RBP3.01□□□□□ -1.93
COPS3-217ENST00000583160 LMTK2Q8IWU2 1503 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 STRCP1A6NGW2 1772 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 UBR1Q8IWV7 1749 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 LRRC9Q6ZRR7 1453 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 IQGAP1P46940 1657 aa3.01□□□□□ -1.93
COPS3-217ENST00000583160 TNRQ92752 1358 aa3□□□□□ -1.93
COPS3-217ENST00000583160 HEG1Q9ULI3 1381 aa3□□□□□ -1.93
COPS3-217ENST00000583160 XIRP1Q702N8 1843 aaKnown RBP3□□□□□ -1.93
COPS3-217ENST00000583160 DUOX2Q9NRD8 1548 aa3□□□□□ -1.93
COPS3-217ENST00000583160 TRGV8A0A0C4DH27 118 aa3□□□□□ -1.93
COPS3-217ENST00000583160 IGHV3-16A0A0C4DH30 117 aa3□□□□□ -1.93
COPS3-217ENST00000583160 E9PAM4 449 aa3□□□□□ -1.93
COPS3-217ENST00000583160 H3BMM5 538 aa3□□□□□ -1.93
COPS3-217ENST00000583160 RTL8CO15255 209 aa3□□□□□ -1.93
COPS3-217ENST00000583160 INPP4BO15327 924 aa3□□□□□ -1.93
COPS3-217ENST00000583160 KIF5CO60282 957 aa3□□□□□ -1.93
COPS3-217ENST00000583160 DIAPH2O60879 1101 aa3□□□□□ -1.93
COPS3-217ENST00000583160 MT-ND1P03886 318 aa3□□□□□ -1.93
COPS3-217ENST00000583160 FAM200BP0CF97 657 aa3□□□□□ -1.93
COPS3-217ENST00000583160 CPT2P23786 658 aa3□□□□□ -1.93
COPS3-217ENST00000583160 ACAT1P24752 427 aaKnown RBP3□□□□□ -1.93
COPS3-217ENST00000583160 ELK3P41970 407 aa3□□□□□ -1.93
COPS3-217ENST00000583160 SULT2A1Q06520 285 aa3□□□□□ -1.93
COPS3-217ENST00000583160 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
COPS3-217ENST00000583160 CCBE1Q6UXH8 406 aaPredicted RBP3□□□□□ -1.93
COPS3-217ENST00000583160 ENOSF1Q7L5Y1 443 aa3□□□□□ -1.93
COPS3-217ENST00000583160 EXT2Q93063 718 aa3□□□□□ -1.93
COPS3-217ENST00000583160 NABP1Q96AH0 204 aa3□□□□□ -1.93
COPS3-217ENST00000583160 CFAP57Q96MR6 1250 aa3□□□□□ -1.93
COPS3-217ENST00000583160 NUDT16L1Q9BRJ7 211 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms