RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PCDHB18PQ96TA0 734 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 LRRCC1Q9C099 1032 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 MOB1AQ9H8S9 216 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 KCNK13Q9HB14 408 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 DBF4Q9UBU7 674 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 B4GALT7Q9UBV7 327 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 ZNF256Q9Y2P7 627 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 KLK4Q9Y5K2 254 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 AUP1Q9Y679 476 aa2.49□□□□□ -2.01
SMCHD1-206ENST00000581631 TRIM49BA6NDI0 452 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 RPL37AP8A6NKH3 93 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 ANXA2P2A6NMY6 339 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 TCP10L2B9ZVM9 353 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 LMO7DNF2Z398 122 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 K7EQG2 157 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 FLRT2O43155 660 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 FCGR3BO75015 233 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 SH3BGRLO75368 114 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 PGLSO95336 258 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 RENP00797 406 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 C9P02748 559 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 DLATP10515 647 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 PDGFRAP16234 1089 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 PTAFRP25105 342 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 GSK3BP49841 420 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 NPY4RP50391 375 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 HLCSP50747 726 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 PRELPP51888 382 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 HNRNPA3P51991 378 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 RIDAP52758 137 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 ACY1Q03154 408 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 FAM46CQ5VWP2 391 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 VITQ6UXI7 678 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 C15orf52Q6ZUT6 534 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 GPD1LQ8N335 351 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 PARP8Q8N3A8 854 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 CSNK1G2-AS1Q8NCQ2 148 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 Q8NFD4 153 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 NCOA7Q8NI08 942 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 ST6GALNAC6Q969X2 333 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 HNRNPABQ99729 332 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 STRADBQ9C0K7 418 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 OR10A4Q9H209 315 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 FNDC4Q9H6D8 234 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 C10orf88Q9H8K7 445 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 WDR41Q9HAD4 459 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 TNFRSF19Q9NS68 423 aa2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 CHCHD3Q9NX63 227 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-206ENST00000581631 IGHV3-16A0A0C4DH30 117 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 A0A1B0GTH9 108 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 NPIPA3F8WFD2 350 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 MOCS2O96007 188 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 SP9P0CG40 484 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 BDNFP23560 247 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 FCGR2BP31994 310 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 FCGR2CP31995 323 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 OR3A3P47888 321 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 EVCP57679 992 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 PTENP60484 403 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 NDPQ00604 133 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 C3AR1Q16581 482 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 ZRANB3Q5FWF4 1079 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 TCEAL6Q6IPX3 200 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 TMEM182Q6ZP80 229 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 ADCK1Q86TW2 530 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 RPAINQ86UA6 219 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 OR8H2Q8N162 312 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 OCC1Q8TAD7 63 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 NABP1Q96AH0 204 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 SIPA1Q96FS4 1042 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 MGME1Q9BQP7 344 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 RBM24Q9BX46 236 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 NACAP1Q9BZK3 213 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 C5orf66Q9H5L9 145 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 MRGBPQ9NV56 204 aa2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 ZNF346Q9UL40 294 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-206ENST00000581631 TSPY2A6NKD2 308 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF732B4DXR9 585 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 TXNL1O43396 289 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 PLOD3O60568 738 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 MT-ND1P03886 318 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 GBAP04062 536 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ANKRD34CP0C6C1 535 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ADRA2CP18825 462 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 PRKCIP41743 596 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 ZNF41P51814 821 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 CRYBA2P53672 197 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 PEX3P56589 373 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 CNTN1Q12860 1018 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 PPA1Q15181 289 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 MAPK11Q15759 364 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 TMEM44Q2T9K0 475 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 SHEQ5VZ18 495 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 FAM91A1Q658Y4 838 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 TXNRD3NBQ6F5E7 133 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 KLHL10Q6JEL2 608 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 CLEC4GQ6UXB4 293 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 C17orf107Q6ZR85 190 aa2.46□□□□□ -2.02
SMCHD1-206ENST00000581631 SPATA21Q7Z572 469 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms