RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 PCBP2Q15366 365 aaKnown RBP eCLIP13.66□□□□□ -0.22
IFT20-211ENST00000580991 ACSBG2Q5FVE4 666 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 C1orf185Q5T7R7 199 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 RIPPLY2Q5TAB7 128 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 NDUFAF5Q5TEU4 345 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 CAPN13Q6MZZ7 669 aaPredicted RBP13.66□□□□□ -0.22
IFT20-211ENST00000580991 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 HDXQ7Z353 690 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
IFT20-211ENST00000580991 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 NOA1Q8NC60 698 aaKnown RBP13.66□□□□□ -0.22
IFT20-211ENST00000580991 APCDD1LQ8NCL9 501 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 FBXO15Q8NCQ5 510 aaPredicted RBP13.66□□□□□ -0.22
IFT20-211ENST00000580991 OR2M7Q8NG81 312 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 OSBPL9Q96SU4 736 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 CHRAC1Q9NRG0 131 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 BEX4Q9NWD9 120 aaPredicted RBP13.66□□□□□ -0.22
IFT20-211ENST00000580991 ACAD8Q9UKU7 415 aa13.66□□□□□ -0.22
IFT20-211ENST00000580991 TRBV11-1A0A0K0K1C0 115 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 A0A1B0GVC2 190 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 TCRBV16S1A1N1A0A5B0 115 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 PINLYPA6NC86 204 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 AQP7O14520 342 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 ARHGEF9O43307 516 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 CHST10O43529 356 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 ESR1P03372 595 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 FMO4P31512 558 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 COILP38432 576 aaPredicted RBP13.65□□□□□ -0.22
IFT20-211ENST00000580991 SSR4P51571 173 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 PPP2R2BQ00005 443 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 KCNJ11Q14654 390 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 WLSQ5T9L3 541 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 NIPAL1Q6NVV3 410 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 AADACL2Q6P093 401 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 TRILQ7L0X0 811 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 OTUD6BQ8N6M0 293 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 RNASE6Q93091 150 aaKnown RBP13.65□□□□□ -0.22
IFT20-211ENST00000580991 SARAFQ96BY9 339 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 COX4I2Q96KJ9 171 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 ETNK1Q9HBU6 452 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
IFT20-211ENST00000580991 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
IFT20-211ENST00000580991 FBXW2Q9UKT8 454 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 YARS2Q9Y2Z4 477 aaKnown RBP13.65□□□□□ -0.22
IFT20-211ENST00000580991 LIPGQ9Y5X9 500 aa13.65□□□□□ -0.22
IFT20-211ENST00000580991 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 HSPB2A8KAH6 182 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 A8MVJ9 347 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 E7EVH7 732 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 CES2O00748 559 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 PFDN6O15212 129 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 SLC16A5O15375 505 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 SUSD5O60279 629 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 GALR3O60755 368 aaPredicted RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 EPXP11678 715 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 GABRA1P14867 456 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 MAOAP21397 527 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 TACR1P25103 407 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 GRK3P35626 688 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 ASCL1P50553 236 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 ADARP55265 1226 aaKnown RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 BTG2P78543 158 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 HSPB2Q16082 182 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 PCID2Q5JVF3 399 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 BEND6Q5SZJ8 279 aaPredicted RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 SDCCAG8Q86SQ7 713 aaPredicted RBP13.64□□□□□ -0.23
IFT20-211ENST00000580991 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 ARMC2Q8NEN0 867 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 B3GNT7Q8NFL0 401 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 LPGAT1Q92604 370 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 SH3GL2Q99962 352 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 FUT8Q9BYC5 575 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 PCBD2Q9H0N5 130 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 TREX1Q9NSU2 369 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 HPF1Q9NWY4 346 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 ALKBH4Q9NXW9 302 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 GALPQ9UBC7 116 aa13.64□□□□□ -0.23
IFT20-211ENST00000580991 SONP18583 2426 aaKnown RBP13.63□□□□□ -0.23
IFT20-211ENST00000580991 IGKV3D-11A0A0A0MRZ8 115 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 TUBAL3A6NHL2 446 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 A8MUA0 341 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 E5RI56 91 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 DVL2O14641 736 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 ZBTB14O43829 449 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 LCMT2O60294 686 aaKnown RBP13.63□□□□□ -0.23
IFT20-211ENST00000580991 GOSR1O95249 250 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 ALOX12P18054 663 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 CD53P19397 219 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 IMPA1P29218 277 aa13.63□□□□□ -0.23
IFT20-211ENST00000580991 FDFT1P37268 417 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms