RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 CNTN4Q8IWV2 1026 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 GPALPP1Q8IXQ4 340 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 DMRTC2Q8IXT2 367 aaPredicted RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 PPIL6Q8IXY8 311 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 AGGF1Q8N302 714 aaeCLIP9.59□□□□□ -0.87
GGA3-210ENST00000580799 MARVELD2Q8N4S9 558 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 NAT8LQ8N9F0 302 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 VMP1Q96GC9 406 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 PDLIM5Q96HC4 596 aaKnown RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 SMIM10Q96HG1 83 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 AIF1LQ9BQI0 150 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 CCDC77Q9BR77 488 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 PELI2Q9HAT8 420 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 NECTIN3Q9NQS3 549 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 KCNN3Q9UGI6 736 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 FBXW2Q9UKT8 454 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 CORO1CQ9ULV4 474 aaPredicted RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 RNF6Q9Y252 685 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 YARS2Q9Y2Z4 477 aaKnown RBP9.59□□□□□ -0.87
GGA3-210ENST00000580799 HRH3Q9Y5N1 445 aa9.59□□□□□ -0.87
GGA3-210ENST00000580799 ACOT7O00154 380 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 CLDN4O14493 209 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 MYO1DO94832 1006 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 TOXO94900 526 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 GUCA1CO95843 209 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 AHSGP02765 367 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 HOXD4P09016 255 aaPredicted RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 GABRB3P28472 473 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 RFC3P40938 356 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 HNF4AP41235 474 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 SSR4P51571 173 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 HSD17B7P56937 341 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 STXBP1P61764 594 aaKnown RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 HYAL2Q12891 473 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 CYP1B1Q16678 543 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 SPANXN3Q5MJ09 141 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 RBM20Q5T481 1227 aaKnown RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 CES4AQ5XG92 561 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 CCDC137Q6PK04 289 aaKnown RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 CLYBLQ8N0X4 340 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 CA13Q8N1Q1 262 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 PSD4Q8NDX1 1056 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 GRK7Q8WTQ7 553 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 SEC16BQ96JE7 1060 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 FAR2Q96K12 515 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 TSNARE1Q96NA8 513 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 NAP1L3Q99457 506 aaPredicted RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 ZNF559Q9BR84 538 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 NPLQ9BXD5 320 aaPredicted RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 SPNS1Q9H2V7 528 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 RHBGQ9H310 441 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 ERVK-11Q9UQG0 969 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 MRPS33Q9Y291 106 aaKnown RBP9.58□□□□□ -0.88
GGA3-210ENST00000580799 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 KCNE2Q9Y6J6 123 aa9.58□□□□□ -0.88
GGA3-210ENST00000580799 AKAP9Q99996 3911 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 A0A088AWK7 358 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 FAM221AA4D161 298 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 NKX2-6A6NCS4 301 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 OR14I1A6ND48 311 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 FAM90A27PA6NNH2 459 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 A8MUA0 341 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ZFAND5O76080 213 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ZNF10P21506 573 aaPredicted RBP9.57□□□□□ -0.88
GGA3-210ENST00000580799 GSTM2P28161 218 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 HPDP32754 393 aaPredicted RBP9.57□□□□□ -0.88
GGA3-210ENST00000580799 HNMTP50135 292 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 GPR143P51810 404 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ART1P52961 327 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 GPR85P60893 370 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 PPIAP62937 165 aaKnown RBP9.57□□□□□ -0.88
GGA3-210ENST00000580799 RBBP5Q15291 538 aaKnown RBP9.57□□□□□ -0.88
GGA3-210ENST00000580799 EMC4Q5J8M3 183 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 HECTD2Q5U5R9 776 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 FAM45BPQ6NSW5 357 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 NXPE4Q6UWF7 544 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 SBSNQ6UWP8 590 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 TMPRSS11BQ86T26 416 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 SLC22A16Q86VW1 577 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 THOC6Q86W42 341 aaKnown RBP9.57□□□□□ -0.88
GGA3-210ENST00000580799 SCUBE1Q8IWY4 988 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ZNF595Q8IYB9 648 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 MYRIPQ8NFW9 859 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 TTLQ8NG68 377 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 OR52N2Q8NGI0 321 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 OR5M3Q8NGP4 307 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 FAM45AQ8TCE6 357 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 CREB3L4Q8TEY5 395 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ANKRD7Q92527 254 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 GAL3ST3Q96A11 431 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 CERS2Q96G23 380 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 PBKQ96KB5 322 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 KLHL31Q9H511 634 aa9.57□□□□□ -0.88
GGA3-210ENST00000580799 ZDHHC11Q9H8X9 412 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms