RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 LACC1Q8IV20 430 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 GPALPP1Q8IXQ4 340 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 RAB42Q8N4Z0 105 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 OR13J1Q8NGT2 312 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 ROBO4Q8WZ75 1007 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 TBC1D20Q96BZ9 403 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 SCYL1Q96KG9 808 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PKNOX2Q96KN3 472 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PTCHD1Q96NR3 888 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PRAP1Q96NZ9 151 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 AARSD1Q9BTE6 412 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PACSIN1Q9BY11 444 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC6A15Q9H2J7 730 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 ANKHQ9HCJ1 492 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 NECTIN3Q9NQS3 549 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF701Q9NV72 531 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PIH1D1Q9NWS0 290 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 HPF1Q9NWY4 346 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 UVRAGQ9P2Y5 699 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 PPIEQ9UNP9 301 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 EIF3LQ9Y262 564 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 YARS2Q9Y2Z4 477 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 AAR2Q9Y312 384 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 YLPM1P49750 1951 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 DYSFO75923 2080 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 KCNE1BA0A087WTH5 132 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 A8MV72 311 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 AHRRA9YTQ3 701 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 MYO1CO00159 1063 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CTIFO43310 598 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CHST10O43529 356 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 KIF5CO60282 957 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 MATN4O95460 622 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 GOT2P00505 430 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 IL2RAP01589 272 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CCL3P10147 92 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CTSSP25774 331 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CCNFP41002 786 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ADARP55265 1226 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 UBE2HP62256 183 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 RELBQ01201 579 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CRYZQ08257 329 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 FOXF2Q12947 444 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 TSTA3Q13630 321 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 TFDP2Q14188 446 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 SIX1Q15475 284 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ANKRD20A2Q5SQ80 823 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ANKRD20A1Q5TYW2 823 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ANKRD20A3Q5VUR7 823 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 KCTD11Q693B1 232 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ITPRIPL1Q6GPH6 555 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ALKBH5Q6P6C2 394 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 QSOX2Q6ZRP7 698 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ADCK2Q7Z695 626 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 LDB1Q86U70 411 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 LRRC56Q8IYG6 542 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 AFAP1L2Q8N4X5 818 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 B3GNT7Q8NFL0 401 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 OR9A1PQ8NGU1 263 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ASB15Q8WXK1 588 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 P3H4Q92791 437 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF837Q96EG3 531 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 PIK3IP1Q96FE7 263 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 MARK4Q96L34 752 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 RASL10BQ96S79 203 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 RBM24Q9BX46 236 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 REG4Q9BYZ8 158 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 EXO5Q9H790 373 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF703Q9H7S9 590 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC2A6Q9UGQ3 507 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 FEZ2Q9UHY8 353 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF281Q9Y2X9 895 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 ATG4BQ9Y4P1 393 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 WIF1Q9Y5W5 379 aa7.06□□□□□ -1.28
SMARCE1-217ENST00000580654 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 MBD3L3A6NE82 208 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 HACD1B0YJ81 288 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 E7ENX8 843 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 WWP2O00308 870 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 CASKO14936 926 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 LCMT2O60294 686 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 GALR3O60755 368 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 MYO1DO94832 1006 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 CCNDBP1O95273 360 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 IL18BPO95998 194 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 TP53P04637 393 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PPP2R1BP30154 601 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 OPRM1P35372 400 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PIGAP37287 484 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 COILP38432 576 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 PNLIPRP1P54315 467 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 ABATP80404 500 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 TAP2Q03519 686 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 GBX1Q14549 363 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 TMED2Q15363 201 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 CLEC12BQ2HXU8 276 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 LRRC38Q5VT99 294 aa7.05□□□□□ -1.28
SMARCE1-217ENST00000580654 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms