RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 MACROD1Q9BQ69 325 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 FAM129AQ9BZQ8 928 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 ZNF629Q9UEG4 869 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 ZKSCAN5Q9Y2L8 839 aa12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 YARS2Q9Y2Z4 477 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-211ENST00000579316 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 SMAPO00193 183 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 SLC16A8O95907 504 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 FGGP02679 453 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 ENDOUP21128 410 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 HRH2P25021 359 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 CXCR5P32302 372 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TTPAP49638 278 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 CLCN2P51788 898 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TSTA3Q13630 321 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TERF2Q15554 542 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 MAATS1Q7Z4T9 603 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 LRRC56Q8IYG6 542 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 FBXW8Q8N3Y1 598 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 KCT2Q8NC54 265 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 B3GNT7Q8NFL0 401 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 ZNF480Q8WV37 535 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TRIM44Q96DX7 344 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 PKP4Q99569 1192 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 FAM173AQ9BQD7 235 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 HOMER3Q9NSC5 361 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 MARCH4Q9P2E8 410 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
CSNK1D-211ENST00000579316 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 ZNF860A6NHJ4 632 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 A8MVJ9 347 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 SLC16A5O15375 505 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 METTL18O95568 372 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 CELA3AP09093 270 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 KRTAP1-1Q07627 177 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 FOXO1Q12778 655 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 HERC3Q15034 1050 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 LDB1Q86U70 411 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 ULK2Q8IYT8 1036 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 SLC35B2Q8TB61 432 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 PEX13Q92968 403 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 ZNF778Q96MU6 729 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 DACH2Q96NX9 599 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 HPF1Q9NWY4 346 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 ZNF223Q9UK11 482 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-211ENST00000579316 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 PGRMC1O00264 195 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 CES2O00748 559 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 PSMD3O43242 534 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 LIASO43766 372 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 GALR3O60755 368 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 IFNA2P01563 188 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 CATP04040 527 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 TCP1P17987 556 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 TIMP3P35625 211 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 POU4F3Q15319 338 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 P3H1Q32P28 736 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 LINC00523Q86TU6 105 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 ASPGQ86U10 573 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 MPP5Q8N3R9 675 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 FBXO15Q8NCQ5 510 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 ATG4AQ8WYN0 398 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 AARSD1Q9BTE6 412 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 CATSPERZQ9NTU4 200 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 JKAMPQ9P055 326 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 FBXW2Q9UKT8 454 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 SNX12Q9UMY4 172 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
CSNK1D-211ENST00000579316 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 ATP6AP2A0A1C7CYW4 349 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 CLDN4O14493 209 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 CHST10O43529 356 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 B4GALT2O60909 372 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 ATP6AP2O75787 350 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 OR6B1O95007 311 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 MAOAP21397 527 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 CNR1P21554 472 aa12.81□□□□□ -0.36
CSNK1D-211ENST00000579316 ADRA1DP25100 572 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms