RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ZNF750Q32MQ0 723 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 Q5PR19 223 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 MRNIPQ6NTE8 343 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 GK5Q6ZS86 529 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 MFSD9Q8NBP5 474 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ASB11Q8WXH4 323 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 SLC30A3Q99726 388 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 FAM129AQ9BZQ8 928 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 PRDM9Q9NQV7 894 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 RAB6BQ9NRW1 208 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 PNO1Q9NRX1 252 aaKnown RBP15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 TREX1Q9NSU2 369 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZFATQ9P243 1243 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 HEATR5BQ9P2D3 2071 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 MXRA5Q9NR99 2828 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 PFDN6O15212 129 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 PRKNO60260 465 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 SUSD5O60279 629 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 IFNB1P01574 187 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 APRTP07741 180 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZNF888P0CJ79 500 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 GABRA1P14867 456 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 CNR1P21554 472 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 FDFT1P37268 417 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 NAP1L1P55209 391 aaKnown RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 SKP1P63208 163 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 HECTD2Q5U5R9 776 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 CES3Q6UWW8 571 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 C17orf64Q86WR6 236 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 PRELID2Q8N945 189 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 SLC35B2Q8TB61 432 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 NCLNQ969V3 563 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 CAPZA3Q96KX2 299 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 FAM173AQ9BQD7 235 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 YIPF4Q9BSR8 244 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 IL1RL2Q9HB29 575 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZNF223Q9UK11 482 aaPredicted RBP15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 PCDHA13Q9Y5I0 950 aa15.09■□□□□ 0.01
CTDNEP1-211ENST00000575783 HIVEP2P31629 2446 aa15.08■□□□□ 0.01
CTDNEP1-211ENST00000575783 IGKV3D-11A0A0A0MRZ8 115 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 CLCA1A8K7I4 914 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 WWP2O00308 870 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 OR1F1O43749 312 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 CEP104O60308 925 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 ZFAND5O76080 213 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 CDH1P12830 882 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 SOX3P41225 446 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 SKIV2L2P42285 1042 aaKnown RBP15.08■□□□□ 0
CTDNEP1-211ENST00000575783 TTLL9Q3SXZ7 439 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 RNF187Q5TA31 235 aaPredicted RBP15.08■□□□□ 0
CTDNEP1-211ENST00000575783 FAM47EQ6ZV65 393 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 SEM1Q6ZVN7 128 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 UBE2R2Q712K3 238 aaPredicted RBP15.08■□□□□ 0
CTDNEP1-211ENST00000575783 PRUNE1Q86TP1 453 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 GPALPP1Q8IXQ4 340 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 SIMC1Q8NDZ2 872 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 KIAA1191Q96A73 305 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 VMP1Q96GC9 406 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 Q96MF0 132 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 PCBD2Q9H0N5 130 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 TRMT1Q9NXH9 659 aaKnown RBP15.08■□□□□ 0
CTDNEP1-211ENST00000575783 SAMD15Q9P1V8 674 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 TLN2Q9Y4G6 2542 aa15.08■□□□□ 0
CTDNEP1-211ENST00000575783 TRGV5A0A0B4J1U4 118 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 TCRBV7S2A1N4TA0A589 114 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 GFYI3L273 518 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 C8BP07358 591 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 ARNTP27540 789 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 HNF4AP41235 474 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 DNASE1L1P49184 302 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 CLCN7P51798 805 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 CXorf67Q86X51 503 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-211ENST00000575783 KIF18BQ86Y91 864 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 NAXEQ8NCW5 288 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 TNIP2Q8NFZ5 429 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 ATG4AQ8WYN0 398 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 PDLIM2Q96JY6 352 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 TCF12Q99081 682 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 SPRR3Q9UBC9 169 aa15.07■□□□□ 0
CTDNEP1-211ENST00000575783 FOXD3Q9UJU5 478 aaPredicted RBP15.07■□□□□ 0
CTDNEP1-211ENST00000575783 RNH1P13489 461 aaKnown RBP15.06■□□□□ 0
CTDNEP1-211ENST00000575783 ETS1P14921 441 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 PPP2R1BP30154 601 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 STIP1P31948 543 aaKnown RBP15.06■□□□□ 0
CTDNEP1-211ENST00000575783 ADARP55265 1226 aaKnown RBP15.06■□□□□ 0
CTDNEP1-211ENST00000575783 WNT3P56703 355 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 RAB8AP61006 207 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 PWP1Q13610 501 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 FBXL19-AS1Q494R0 122 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 NIPAL1Q6NVV3 410 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 CYHR1Q6ZMK1 362 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 ABHD13Q7L211 337 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 ULK2Q8IYT8 1036 aa15.06■□□□□ 0
CTDNEP1-211ENST00000575783 GIMAP7Q8NHV1 300 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms