RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 WNT6Q9Y6F9 365 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 KRBA1A5PL33 1030 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 CLCA1A8K7I4 914 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 ITGA2P17301 1181 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 PTPN2P17706 415 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 TGM1P22735 817 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 ITGB8P26012 769 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 C21orf33P30042 268 aaPredicted RBP8.57□□□□□ -1.04
NCBP3-204ENST00000574911 OR1E2P47887 323 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 LIMS1P48059 325 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 CDH12P55289 794 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 TAP2Q03519 686 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 PERM1Q5SV97 790 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 IER5LQ5T953 404 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 HIST2H2AA3Q6FI13 130 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 ANGPTL8Q6UXH0 198 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 PLD3Q8IV08 490 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 LGI4Q8N135 537 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 KIAA1958Q8N8K9 716 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 PROX1Q92786 737 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 ITFG2Q969R8 447 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 MTERF3Q96E29 417 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 RAD9AQ99638 391 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 TCF25Q9BQ70 676 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 WRAP53Q9BUR4 548 aaKnown RBP8.57□□□□□ -1.04
NCBP3-204ENST00000574911 SPNS1Q9H2V7 528 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 OR51B5Q9H339 312 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 TRNAU1APQ9NX07 287 aaKnown RBP8.57□□□□□ -1.04
NCBP3-204ENST00000574911 SPASTQ9UBP0 616 aa8.57□□□□□ -1.04
NCBP3-204ENST00000574911 MYOFQ9NZM1 2061 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TMEM247A6NEH6 219 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 EFCAB14O75071 495 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 RHOP08100 348 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 CLTBP09497 229 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ARAFP10398 606 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 CSF2RAP15509 400 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 XCR1P46094 333 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 GSSP48637 474 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PRIM2P49643 509 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PCBP3P57721 371 aaKnown RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TAS2R50P59544 299 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ERVFC1P60507 584 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 RPS3AP61247 264 aaKnown RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TUBA1BP68363 451 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 CDK6Q00534 326 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 STARD3Q14849 445 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF630Q2M218 657 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM40Q6P9F5 258 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TUBA1AQ71U36 451 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PAGE2Q7Z2X7 111 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF605Q86T29 641 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 RNF130Q86XS8 419 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 SNX29P2Q8IUI4 249 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 OR52J3Q8NH60 311 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 OTUB2Q96DC9 234 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ZHX1-C8orf76Q96EF9 292 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 LINC00615Q96LM1 132 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 DACH2Q96NX9 599 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TAS2R9Q9NYW1 312 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TSC22D4Q9Y3Q8 395 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 HCFC2Q9Y5Z7 792 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PRAMEF33A0A0G2JMD5 474 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 METTL15A6NJ78 407 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 HIDE1A8MVS5 230 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 J3KTA2 159 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 AIREO43918 545 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PRAMEF10O60809 474 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PAPLNO95428 1278 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 KLK1P06870 262 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PIK3CBP42338 1070 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 HMGA2P52926 109 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 CBX3Q13185 183 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 SYT16Q17RD7 645 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TIGD6Q17RP2 521 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 SLC5A12Q1EHB4 618 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 SLC46A3Q7Z3Q1 461 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM74Q86UV6 250 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF366Q8N895 744 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 DENND6BQ8NEG7 585 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 GEMIN6Q8WXD5 167 aaKnown RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ZSWIM3Q96MP5 696 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PIP5K1AQ99755 562 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TMEM121BQ9BXQ6 578 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 OR2AG1Q9H205 316 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 DCSTAMPQ9H295 470 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 DSN1Q9H410 356 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ITM2CQ9NQX7 267 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 ACER3Q9NUN7 267 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 PNMA8BQ9ULN7 279 aaPredicted RBP8.56□□□□□ -1.04
NCBP3-204ENST00000574911 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
NCBP3-204ENST00000574911 A0A1W2PRB8 838 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 K7ESM1 405 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ADAM23O75077 832 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 KRT75O95678 551 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms