RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TEX51A0A1B0GUA7 166 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 C9J4A7 227 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 ITGAXP20702 1163 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 HIST1H1TP22492 207 aaPredicted RBP16.19■□□□□ 0.18
NUP88-210ENST00000574867 PDCD2Q16342 344 aaPredicted RBP16.19■□□□□ 0.18
NUP88-210ENST00000574867 OR4C11Q6IEV9 310 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 METTL4Q8N3J2 472 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 DTWD1Q8N5C7 304 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 AMER3Q8N944 861 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 FGF11Q92914 225 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 COL26A1Q96A83 441 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 NPLQ9BXD5 320 aaPredicted RBP16.19■□□□□ 0.18
NUP88-210ENST00000574867 MRPL1Q9BYD6 325 aaKnown RBP16.19■□□□□ 0.18
NUP88-210ENST00000574867 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
NUP88-210ENST00000574867 PRDM7Q9NQW5 492 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 RIC8BQ9NVN3 520 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 PNPOQ9NVS9 261 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 ADAM29Q9UKF5 820 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 MAP4K5Q9Y4K4 846 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 NCOR2Q9Y618 2525 aa16.19■□□□□ 0.18
NUP88-210ENST00000574867 SGK494L7N484 410 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 HDAC3O15379 428 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 B3GALT2O43825 422 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 RDH16O75452 317 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 LINC00032P0C843 101 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 ATP5A1P25705 553 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 STAT5AP42229 794 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 OR1D4P47884 311 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 TBL3Q12788 808 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 FAM47EQ6ZV65 393 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 ZCCHC7Q8N3Z6 543 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 TMEM121BQ9BXQ6 578 aaPredicted RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 ZNF717Q9BY31 904 aaPredicted RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 IFT80Q9P2H3 777 aaPredicted RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 MARCOQ9UEW3 520 aaPredicted RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 CCL27Q9Y4X3 112 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 PTGDR2Q9Y5Y4 395 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 MAU2Q9Y6X3 613 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 A0A0G2JN53 185 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 TRPC5OSA6NMA1 111 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 TCP11X1B4DZS4 312 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 RTCAO00442 366 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 ALBP02768 609 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 CD63P08962 238 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 CERS1P27544 350 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 BSGP35613 385 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 BTKQ06187 659 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 ACSM2AQ08AH3 577 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 NR6A1Q15406 480 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 SPDYAQ5MJ70 313 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 ACSM2BQ68CK6 577 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 ZNF793Q6ZN11 406 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 COMMD6Q7Z4G1 85 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 SNIP1Q8TAD8 396 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 CHST8Q9H2A9 424 aa16.18■□□□□ 0.18
NUP88-210ENST00000574867 DDX31Q9H8H2 851 aaKnown RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 GPN3Q9UHW5 284 aaPredicted RBP16.18■□□□□ 0.18
NUP88-210ENST00000574867 CEP295Q9C0D2 2601 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 ZNF860A6NHJ4 632 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 C21orf140B9A014 251 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 EDF1O60869 148 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 B3GALT4O96024 378 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 COL9A2Q14055 689 aaPredicted RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 FAM198BQ6UWH4 519 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 Q6ZSR9 355 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 COX15Q7KZN9 410 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 WDR75Q8IWA0 830 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 C1orf52Q8N6N3 182 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 ACOT4Q8N9L9 421 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 ADAMTS18Q8TE60 1221 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 CHTF18Q8WVB6 975 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 NKD1Q969G9 470 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 PPP3R2Q96LZ3 170 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 SLC26A1Q9H2B4 701 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 MKKSQ9NPJ1 570 aaPredicted RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 C1orf109Q9NX04 203 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 SIRT5Q9NXA8 310 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 ZNF282Q9UDV7 671 aaPredicted RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 JUNP05412 331 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 KITP10721 976 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 OVCH1Q7RTY7 1134 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 IL22RA1Q8N6P7 574 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 ZNF248Q8NDW4 579 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 OR2T11Q8NH01 316 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 NUF2Q9BZD4 464 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 WDR54Q9H977 334 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 MEAF6Q9HAF1 191 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 LRTM1Q9HBL6 345 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 LYRM4Q9HD34 91 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 SLC22A11Q9NSA0 550 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 C14orf105Q9NVL8 296 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 LYARQ9NX58 379 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 HCN3Q9P1Z3 774 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 TRPC4Q9UBN4 977 aa16.17■□□□□ 0.18
NUP88-210ENST00000574867 NXT1Q9UKK6 140 aaKnown RBP16.17■□□□□ 0.18
NUP88-210ENST00000574867 AHCTF1Q8WYP5 2266 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 SCN3AQ9NY46 2000 aa16.16■□□□□ 0.18
NUP88-210ENST00000574867 SEC16AO15027 2179 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms